This Special Issue of Toxins, entitled "Cellular Entry of Binary and Pore-Forming Bacterial Toxins," gives a sense of the recent advances in characterizing the functional and structural aspects of this broad scientific problem that goes beyond the classical field of toxinology and microbiology and spills into the general areas of biochemistry, biophysics, and molecular and cell biology. The contributions to this Special Issue include several experimental articles, employing sophisticated techniques to gain important insights into the mechanism of cellular entry [1-6]; a thought-provoking perspective comment [7]; and two conceptual reviews, one on apicomplexan pore-forming toxins [8] and one on clostridial binary toxins [9]. What have we learned about the field from this collection? Despite the limited selection, some general features can be identified.Deciphering complex pathways requires integration of various approaches. Cellular entry of bacterial toxins utilizes a complex mechanism [8,9] that involves multiple protein partners interacting with each other [3,9] and with a lipid bilayer [1,2,6]. Key players often undergo profound conformational changes, both in aqueous [5] and membranous environments [1,2]. Characterizing these functionally important conformational changes is a prerequisite for deciphering the mechanisms of cellular entry on a molecular level. One of the biggest challenges in establishing the structure-function relationships for bacterial toxins lies in their environment-dependent conformational lability. Consequently, even if a high-resolution structure of the soluble conformation is well-characterized, the mechanism might remain elusive, due to conformational rearrangements triggered by environment acidification and membrane insertion, common for the endosome-dependent pathways. These challenges could be met, for example, by careful examination of site-directed mutagenesis with a variety of functional assays (e.g., for diphtheria toxin [6]), complemented with molecular modeling (e.g., for perfringolysin O [1]). In another example, a sophisticated combination of cryo-electron microscopy, performed on elaborately prepared nanodisc samples, and computer simulations is used to resolve the structure of the pore of the anthrax toxin protective antigen in a lipid environment and in a complex with the toxin's lethal factor [2].Structured vs. unstructured passageways through the membrane. Bridging cellular membranes is a key step in the pathogenic action of both binary and pore-forming toxins. The former use their translocation domains, containing various structural motifs, to ensure efficient delivery of the toxic component into the host cell, while the latter act on the cellular membrane itself. In either case, the integrity of the membrane is compromised via targeted protein-lipid and protein-protein interactions triggered by specific signals, such as proteolytic cleavage and/or endosomal acidification. Several studies presented in this Special Issue either explicitly describe the formation of the...