Increased use of gene manipulation in mice (e.g., targeted or random mutagenesis) has been accompanied by increased reliance on a very few rapid and simple behavioral assays, each of which aspires to model a human behavioral domain. Yet, each assay comprises multiple traits, influenced by multiple genetic factors. Motor incoordination (ataxia), a common characteristic of many neurological disorders, may reflect disordered balance, muscle strength, proprioception, and͞or patterned gait. Impaired motor performance can confound interpretation of behavioral assays of learning and memory, exploration, motivation, and sensory competence. The rotarod is one of the most commonly used tests to measure coordination in mice. We show here that exactly how the rotarod test is performed can markedly alter the apparent patterns of genetic influence both in undrugged performance and sensitivity to ethanol intoxication. However, when tested with well chosen parameters, the accelerating rotarod test showed very high inter-and intralaboratory reliability. Depending on test conditions, ethanol can either disrupt or enhance performance in some strains. Genetic contribution to performance on the accelerating versus the fixed-speed rotarod assay can be completely dissociated under some test conditions, and multiple test parameters are needed to assess the range of genetic influence adequately.T he loss of motor coordination (ataxia) is a common characteristic of many neurological disorders and a frequent endpoint for studies of drug intoxication. Therefore, behavioral assays that model ataxia are of great importance to researchers who are interested in learning more about the mechanisms of drug action and disease. One of the most commonly used tests of motor incoordination is the rotarod (1-4), which has two variants: the accelerating rotarod (ARR) and the fixed-speed rotarod (FSRR). Studies of inbred strains (5-8), selected lines (9), and transgenic animals (10-12) have shown that rotarod performance is highly influenced by genetic background in mice. Genetically distinct mice often differ in their undrugged ability to perform, and differ in their sensitivities to ethanol and other drugs on the task.Although the rotarod is widely used in biomedical research, there is little consensus on the ideal parameters and test schedules to produce optimal results. We have recently completed studies in genetically heterogeneous mice examining the influence of different rod diameters, rotation rate, and training regimens on rotarod performance, as well as their effects on sensitivity to ethanol intoxication. We obtained some expected results (e.g., training on the ARR improved performance, and performance was influenced by acceleration rate). More surprisingly, we found that higher acceleration rates suppressed sensitivity to ethanol intoxication. We also found that rod diameter did not markedly affect performance, provided that the diameter was large enough to prevent passive rotation on the rod (13).Many researchers appear to design behavioral ...