We examined spatial variation in the abundance of 4 benthic vagile species in a lagoon with blue mussel Mytilus edulis aquaculture (inside vs. outside of the mussel lease; among areas with 1 yr old, 2 yr old and harvested mussels; and with distance from mussel lines). American lobster Homarus americanus, Atlantic rock crab Cancer irroratus, common starfish Asterias rubens and winter flounder Pseudopleuronectes americanus were all at least 3 times more abundant in the farm area with 2 yr old mussels, where mussel fall-off is more frequent, than in areas outside of the farm or other areas within the farm. A strong association of lobsters with mussel line structures was observed, where most individuals were observed directly under the mussel lines, close to anchor blocks, in the areas with 1 yr old, 2 yr old and harvested mussels (58, 42 and 57%, respectively). Mussel farms influence the distribution of benthic macrofauna at a number of spatial and temporal scales, and this may be due to a number of mechanisms, depending on the species. An in situ experiment was done to separate the influence of anchor blocks and mussel fall-off on the distribution of lobsters, crabs, starfish and flounders. Results of the manipulative experiment highlighted the importance of shelter structures over a short-term period for lobsters, but not for the other 3 species. Conclusions from the observations and the manipulative experiment suggest that lobster distribution is a function of both physical structure and feeding opportunities, whereas the distribution of the other species was mainly due to trophic effects.