Abstract. The geometric roughness at boundaries has a profound impact on the dynamics of granular flows. For a bumpy base made of fixed particles, two major factors have been separately studied in the literature, namely, the size and spatial distribution of base particles. A recent work has proposed a roughness indicator R a , which combines both factors for any arbitrary bumpy base comprising equally-sized spheres. It is shown in mono-disperse flows that as R a increases, a transition occurs from slip (R a < 0.51) to non-slip (R a > 0.62) conditions. This work focuses on such a phase transition in bi-disperse flows, in which R a can be a function of time. As size segregation takes place, large particles migrate away from the bottom, leading to a variation of size ratio between flow-and base-particles. As a result, base roughness R a evolves with the progress of segregation. Consistent with the slip/non-slip transition in mono-disperse flows, basal sliding arises at low values of R a and the development of segregation might be affected; when R a increases to a certain level (R a > 0.62), non-slip condition is respected. This work extends the validity of R a to bi-disperse flows, which can be used to understand the geometric boundary effect during segregation.