This paper compares modeled biotic and physical effects on intertidal sediment transport, using parameterizations that are based on laboratory and field experiments. A one-dimensional model of an intertidal transect is constructed. The model is aligned cross shore and includes movement of water and suspended sediment. Within the model, tidal currents cause erosion, and bioturbation by the clam, Macoma balthica, alters the erodability of the bed sediment. The concentration of chlorophyll a in the surface sediment (which is an indicator of microphytobenthos density) alters the critical erosion velocity. External sediment supply is specified as an offshore suspended matter concentration. The model is applied within Spurn Bight (Humber Estuary, UK). The effects of various tide heights, biota densities, and external suspended sediment concentrations are investigated. Offshore sediment supply dominates the net deposition below midtide level, but factors affecting intertidal sediment erosion and deposition become important at higher shore levels. Changes in erosion or deposition caused by natural variation in biota densities are as large as those caused by changes in tidal range and currents over a spring-neap cycle, or by doubling external supply. Seasonal variations in densities of stabilizing microphytobenthos can alter the magnitude of net deposition on the upper shore by a factor of two. Interannual variation in numbers of bioturbating clams can change net deposition by a factor of five. These results show that biotic influences on transport of sediment within the intertidal zone are significant and will play a role in determining sediment budgets over tidal to monthly timescales.Sheltered estuaries often have extensive intertidal areas. These are important as both sources and sinks for fine sediment within the estuary. As such, they have a major role in the storage and cycling of those pollutants that preferentially bind to small particles. Mudflats and salt marshes in the U.K. are an important habitat for wintering birds and their prey species. Accretion of mudflats and salt marshes provides a valuable natural coastal defense in a regime of rising sea level, serving to dissipate energy from high tides and storm waves.The shallow coverage of water on the intertidal zones allows wave energy to penetrate to the bed, increasing the effect of small waves on sediment erosion. Rapid tidal flooding and drying of large, low gradient areas can also cause erosion by raising current speeds above the critical value. Turbid water is advected across the flats as the tide rises and is deposited during the long period of low current speeds near high water. Populations of benthic animals can affect erosion and deposition of particles actively (through bioturbation and biodeposition) and passively (by altering sediment characteristics). Algal mats and macroalgae can physically shield sediment, alter cohesiveness, and influence current velocity profiles. This paper addresses the question of how important biotic effects on s...