The specific [3H]prostaglandin (PG) D2 binding was detected by using the slide-mounted sections of rat brain fixed by perfusion with 2% paraformaldehyde. The binding was reversible, saturable, high affinity, Na' dependent, and highly specific for PGD2. These binding characteristics are essentially similar to those observed with the synaptic membrane of rat brain as previously reported. Using autoradiographic image analyses by computerized densitometry and color coding, we visualized the localization of [3H]PGD2 binding in rat brain. A high density of the binding sites was observed in the cerebral cortex, preoptic area, amygdala, hypothalamic nuclei (arcuate nucleus, ventromedial nucleus, and posterior hypothalamic nucleus), thalamic nuclei (reuniens nucleus and rhomboid nucleus), hippocampus, pineal body, and cerebellar cortex. The binding was not significantly observed in the striatum and also was negative in the white matter, arachnoid membranes, and vasculatures.Prostaglandin (PG) D2 is the major PG in the brain of rat and other mammalian species (1-3). The enzymes catalyzing the biosynthesis (4) and metabolic inactivation of PGD2 (5) have been found in the brain and spinal cord and have been investigated in detail (3, 6). The administration of PGD2 into rat brain caused hypothermia (7), induced sleep (8, 9), and inhibited the pulsatile secretion of luteinizing hormone (10). These effects are probably mediated by the interaction between PGD2 and its binding protein (11) that may be linked to the adenylate cyclase system (12). In the present study, we visualized the distribution pattern of [3H]PGD2 binding in rat brain by in vitro labeling, computerized densitometry, and color coding as described by Quirion et al (13). The distribution of the binding protein is unique in comparison with the receptor distribution of other neuroactive substances reported so far (13)(14)(15)(16)(17)(18)(19)(20).MATERIALS AND METHODS Tissue Preparation. Male Wister rats (=300 g) were injected intraperitoneally with indomethacin (1 mg/kg of body weight) to minimize a postmortem endogenous synthesis of PGs. After 1 hr, the rats were perfused with 200 ml of cold 10 mM sodium phosphate-buffered saline (pH 7.4) (Pi/NaCl) containing 20 ,ug of indomethacin per ml. Then, the brains were fixed in situ by perfusion with 200 ml of cold Pi/NaCl containing 2% paraformaldehyde, followed by perfusion with 200 ml of indomethacincontaining Pi/NaCl. The brains were rapidly removed, and 1-to 3-mm slices of appropriate regions were immersed in OCT (Tissue-Tek II, Miles), frozen at -40°C, and cut into serial 10-,um-thick coronal sections at -14C in a cryostat. The sections were thaw-mounted onto acid-washed and gelatin-coated glass slides. Materials prepared in this way can be stored for at least 1 week at 40C without a significant change of specific [3H]PGD2 binding activity.[3H]PGD2 Binding. All procedures of [3H]PGD2 binding assay were performed at 4TC. The tissue sections were preincubated in 50 mM Tris HCl buffer (pH 7.4) containing 0.1 ...