2011
DOI: 10.1007/s11103-011-9849-y
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Characterizing the walnut genome through analyses of BAC end sequences

Abstract: Persian walnut (Juglans regia L.) is an economically important tree for its nut crop and timber. To gain insight into the structure and evolution of the walnut genome, we constructed two bacterial artificial chromosome (BAC) libraries, containing a total of 129,024 clones, from in vitro-grown shoots of J. regia cv. Chandler using the HindIII and MboI cloning sites. A total of 48,218 high-quality BAC end sequences (BESs) were generated, with an accumulated sequence length of 31.2 Mb, representing approximately … Show more

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Cited by 28 publications
(31 citation statements)
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References 65 publications
(64 reference statements)
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“…The following sections depict an overview of these molecular studies and their application (Table 2). Woeste et al 2002;Dangl et al 2005;Hoban et al 2008;Zhang et al 2010;Qi et al 2011;Yi et al 2011;Wu et al 2012;Zhang et al 2013;Chen et al 2013;Najafi et al 2014;Topçu et al 2015;Ikhsan et al 2016;Dang et al 2015;Hu et al 2015;Dang et al 2016 Interspecific hybrids identification Pollegioni et al 2008Pollegioni et al , 2009 Genetic diversity/relationships determination Foroni et al 2005;Dangl et al 2005;Victory et al 2006;Robichaud et al 2006;Wang et al 2008;Aradhya et al 2009;Gunn et al 2010;Karimi et al 2010;Bai et al 2010;Mohsenipoor et al 2010;Ebrahimi et al 2011;Ruiz-Garcia et al 2011;Pollegioni et al 2011;Qi et al 2011;Grauke et al 2012;Mahmoodi et al 2013;Zhang et al 2013;Pop et al 2013;Najafi et al 2014;Dang et al 2015;Hu et al 2015;Han et al 2016;Noor Shah et al 2016;Ćelepirović et al 2016;Wang et al 2016;…”
Section: Historical Overview Of Molecular Marker Development and Usementioning
confidence: 99%
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“…The following sections depict an overview of these molecular studies and their application (Table 2). Woeste et al 2002;Dangl et al 2005;Hoban et al 2008;Zhang et al 2010;Qi et al 2011;Yi et al 2011;Wu et al 2012;Zhang et al 2013;Chen et al 2013;Najafi et al 2014;Topçu et al 2015;Ikhsan et al 2016;Dang et al 2015;Hu et al 2015;Dang et al 2016 Interspecific hybrids identification Pollegioni et al 2008Pollegioni et al , 2009 Genetic diversity/relationships determination Foroni et al 2005;Dangl et al 2005;Victory et al 2006;Robichaud et al 2006;Wang et al 2008;Aradhya et al 2009;Gunn et al 2010;Karimi et al 2010;Bai et al 2010;Mohsenipoor et al 2010;Ebrahimi et al 2011;Ruiz-Garcia et al 2011;Pollegioni et al 2011;Qi et al 2011;Grauke et al 2012;Mahmoodi et al 2013;Zhang et al 2013;Pop et al 2013;Najafi et al 2014;Dang et al 2015;Hu et al 2015;Han et al 2016;Noor Shah et al 2016;Ćelepirović et al 2016;Wang et al 2016;…”
Section: Historical Overview Of Molecular Marker Development and Usementioning
confidence: 99%
“…Additional sets of SSR markers were developed in J. regia from bacterial artificial chromosome (BAC) end sequences (Wu et al 2012;Ikhsan et al 2016), from DNA genomic libraries with specific pattern repeats such as BAAC^or BAAG,^improving the number of informative alleles (Topçu et al 2015), and with EST sequences from the transcriptomes of many organs ). These could potentially be useful in germplasm characterization and linkage mapping.…”
Section: Peak Of Molecular Studies With Ssrs From the Late 2000smentioning
confidence: 99%
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“…Una nueva aproximación al desarrollo de nuevos marcadores de tipo SSRs fue presentada por Wu et al (2012) Debido a que no existen poblaciones estadísticamente comparables, más allá del tipo de híbrido utilizado y de la fuente de plantación, se consideró la totalidad de los datos (12 178), distinguiendo únicamente entre semilla y clon.…”
Section: Micropropagación En El Género Juglansunclassified
“…Estos resultados son un reflejo de la potencialidad de los microsatélites diseñadas de novo, lo que abre la posibilidad de poder ser utilizados en otras especies de la familia Juglandaceae y servir de complemento a los dos sets de marcadores publicados hasta el momento , Wu et al 2012). …”
Section: Genotipado Del Materials Seleccionado Y Determinación Del Podunclassified