“…The main advantages of FCM for microbiology are: rapid assay times and data generation (1-2 min), high numbers of cells that can be analysed per sample (10,000 and upwards), minimal sample volume (from 5 μl), potential high throughput, multiplicity of stains available to examine various aspects of cell viability, structure and/or metabolism (multiparametric), and less labour and space required compared with conventional plating techniques (Wilkinson, 2016). Flow cytometry is used within microbiology in an expanding range of applications including; medical diagnostics (Aebisher, Bartusik, & Tabarkiewicz, 2017;Diaz, Herrero, Garcia, & Quiros, 2010), water treatment and supply quality monitoring (De Roy, Clement, Thas, Wang, & Boon, 2012;Egli & Kotzsch, 2015;Hammes et al, 2008), brewing fermentation monitoring (Achilles, Harms, & Müller, 2006;Bühligen et al, 2014;Overton, 2015), pharmaceutical, environmental testing (Herrero & Diaz, 2015), the dairy industry (Doolan, Nongonierma, Kilcawley, & Wilkinson, 2014;Pane, 2013;Sheehan, O'Loughlin, O'Cuinn, FitzGerald, & Wilkinson, 2005;Yanachkina, McCarthy, Guinee, & Wilkinson, 2016) and for manufacturers of probiotic cultures and products (Davis, 2014;Raymond & Champagne, 2015). The general industrial applications of FCM include rapid detection of pathogens, estimation of cell damage following processing steps such as heating, spray drying and freeze drying, and monitoring of bioprocesses (Diaz et al, 2010;Herrero & Diaz, 2015).…”