5-Methylnicotinamide -adenine dinucleotide and 3-cyano-5-methylpyridine -adenine dinucleotide were prepared from 5-methylthionicotinamide -adenine dinucleotide by chemical conversion. The 5-methylthionicotinamide -adenine dinucleotide was obtained by enzymic transglucosidation. Model compounds ascertained the structure. None of the dinucleotides rnethylated at C-5 was active with the major isoenzyme EE of horse liver alcohol dehydrogenase, but activity with 5-methylnicotinaniide -adenine dinucleotide was measured with the minor isoenzymes. The binding of 5-methylnicotinamide -adenine dinucleotide to liver alcohol dehydrogenase, investigated by X-ray diffraction methods to 0.37-nm resolution, occurs with the pyridinium ring away from the active site as previously described for 3-iodopyridine -adenine and pyridine -adenine dinucleotides. A general conclusion on the use of inhibitors as tools for exploration of the active site is drawn.The X-ray structure determination of the orthorhombic apoenzyme of the alcohol dehydrogenase from horse liver [I] prompted the study of the binding of coenzyme or coenzyme analogues and substrates to clarify the binding mode and the reaction mechanism. It has been shown previously that when an oxidized or a reduced coenzyme is soaked into these crystals, they crack and dissolve. Crystallisation of ternary eiizyme-NADH-substrate complexes gives triclinic or monoclinic crystals with a different conformation of the enzyme molecule [2]. During a screening of coenzyme analogues it was found that 5-methylnicotinamide-adenine dinucleotide (m5NAD)+ did not induce cracking of the orthorhombic crystals in spite of earlier reports that this analogue showed activity as an hydride acceptor [3]. This apparent discrepancy between the activity and absence of crystal cracking prompted us to carry out a more thorough chemical and biochemical study of this analogue and of model compounds. We report here the results of our chemical and biochemical investigations and the structure determination at 0.37-nm resolution of the orthorhombic binary complex alcohol dehydrogenase-m5NAD+. A study of m5NAD+ with lactate dehydrogenase has been reported recently [4]. Enzymes. Alcohol dehydrogenase (EC 1.1.1.1); lactate dehydrogenase (EC 1 .I .1.27); NAD(P)+ glycohydrolase (EC 3.2.2.6); glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12).
MATERIALS AND METHODS
5-
MODEL COMPOUNDS3-Cyano-5-methylpyridine (1). A suspension of 5-methylnicotinamide (3 g) in phosphorous oxychloride ( 5 ml) was heated under reflux for 45 min. After cooling, the excess of reagent was removed under reduced pressure and the mixture poured into a concentrated sodium carbonate solution and extracted thrice with chloroform. The extract was dried over sodium sulfate. Removal of the solvent under reduced pressure gave a solid which was sublimed (65°C under 1.33 Pa). The 3-cyano-5-methyl pyridine (I) was obtained as white crystals (1.93 g, yield 74%): m.p. 82-84°C (cf. 83-84°C [6]). ' H NMR (C'HCI,): 6 = 2.43 ppm (3H), 7.81 ppm (IH) and 8.69 p...