High affinity, retinoid-specific binding proteins chaperone retinoids to manage their transport and metabolism. Proposing mechanisms of retinoid transfer between these binding proteins and membrane-associated retinoid-metabolizing enzymes requires insight into enzyme topology. We therefore determined the topology of mouse retinol dehydrogenase type 1 (Rdh1) and cis-retinoid androgen dehydrogenase type 1 (Crad1) in the endoplasmic reticulum of intact mammalian cells. The properties of Rdh1 were compared with a chimera with a luminal signaling sequence (11-hydroxysteroid dehydrogenase (11-HSD1)(1-41)/Rdh1(23-317); the green fluorescent protein (GFP) fusion proteins Rdh1(1-22)/ GFP, Crad1(1-22)/GFP, and 11-HSD1(1-41)/GFP; and signaling sequence charge difference mutants using confocal immunofluorescence, antibody access, proteinase K sensitivity, and deglycosylation assays. An N-terminal signaling sequence of 22 residues, consisting of a hydrophobic helix ending in a net positive charge, anchors Rdh1 and Crad1 in the endoplasmic reticulum facing the cytoplasm. Mutating arginine to glutamine in the signaling sequence did not affect topology. Inserting one or two arginine residues near the N terminus of the signaling sequence caused 28-95% inversion from cytoplasmic to luminal, depending on the net positive charge remaining at the C terminus of the signaling sequence; e.g. the mutant L3R,L5R,R16Q,R19Q,R21Q faced the lumen. Experiments with N-and C-terminal epitope-tagged Rdh1 and molecular modeling indicated that a hydrophobic helix-turn-helix near the C terminus of Rdh1 (residues 289 -311) projects into the cytoplasm. These data provide insight into the features necessary to orient type III (reverse signal-anchor) proteins and demonstrate that Rdh1, Crad1, and other short-chain dehydrogenases/reductases, which share similar N-terminal signaling sequences such as human Rdh5 and mouse Rdh4, orient with their catalytic domains facing the cytoplasm.Retinol requires conversion into all-trans-retinoic acid to fulfill the vitamin A function of regulating gene expression that begins shortly after conception and continues throughout vertebrate life (1, 2). Retinoid-active SDRs 1 recognize the major physiological form of retinol, retinol bound with CRBP, to generate retinal for irreversible conversion into all-trans-retinoic acid (3). The most active of the retinol dehydrogenases include mouse Rdh1 and its orthologs, rat Rodh1 and -2 and human RDH-E/RoDH4 (4 -8). rRodh2 e.g. has lower apparent K m values with holo-CRBP than with unbound retinol and catalyzes retinal synthesis in the presence of excess apoCRBP. Dehydrogenation of retinol in the presence of excess CRBP with concentrations of both ligand and binding protein in the micromolar range indicates that the reaction proceeds through the SDR accessing CRBP-bound retinol because the CRBP-retinol complex has a K d value ϳ0