Mercury is a highly toxic heavy metal and many DNA-based biosensors have been recently developed for Hg 2+ detection in water. Among them, thymine-rich DNA is the most commonly used for designing Hg 2+ sensors. However, the thymine-Hg 2+ interaction is strongly affected by buffer conditions. We recently reported a molecular beacon containing phosphorothioate (PS)-modified RNA linkages that can be cleaved by Hg 2+ . In this work, the fluorescence quenching and DNA adsorption properties of nano-sized graphene oxide (NGO) were used to develop a new sensor using the PS-RNA chemistry. Three DNA probes were tested, containing one, three and five PS-RNA linkages, respectively. Finally, a fluorophore-labeled poly-A DNA with five PS-RNA linkages was selected and adsorbed by NGO. In the presence of Hg 2+ , the fluorophore was release from NGO due to the cleavage reaction, resulting in fluorescence enhancement. This sensor is highly selective for Hg 2+ with a detection limit of 8.5 nM Hg 2+ . For comparison, a fluorophore-labeled poly-T DNA was also tested, which responded to Hg 2+ slower and was inhibited by high NaCl concentrations, while the PS-RNA probe was more tolerable to different buffer conditions. This work indicates a new way of interfacing DNA with NGO for Hg 2+ detection.3