Complete Genome Sequence of
            <i>Corynebacterium pseudotuberculosis</i>
            I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis

Silva, Artur M. S.; Schneider, Maria Paula Cruz; Cerdeira, Louise; Barbosa, Maria Silvanira; Ramos, Rommel Thiago Jucá; Carneiro, Adriana Ribeiro; Santos, Rodrigo Cardoso; Lima, M F P; D’Afonseca, Vívian; Almeida, Síntia; Santos, Anderson; Soares, Siomar C.; Pinto, Anne Cybelle; Ali, Amjad; Dorella, Fernanda Alves; Rocha, Flávia Souza; Abreu, Vinícius Augusto Carvalho de; Trost, Eva; Tauch, Andreas; Shpigel, Nahum Y.; Miyoshi, Anderson; Azevedo, Vasco

doi:10.1128/jb.01211-10

Cited by 47 publications

(22 citation statements)

References 11 publications

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“…(27,37,57,94,113,149,166,224,267,327). As a result, large numbers of genomes of Corynebacterium species and strains, including C. aurimucosum, C. diphtheriae, C. efficiens, C. glutamicum, C. jeikeium, C. kroppenstedtii, C. pseudotuberculosis, C. ulcerans, and C. urealyticum, have been sequenced, and many are in the process of being sequenced (39,159,213,267,298,299,304,339). The family Corynebacteriaceae contains two genera, Corynebacterium and Turicella (57,103,187,191).…”

Section: Molecular Signatures Of Corynebacterium and The Corynebactermentioning

confidence: 99%

Phylogenetic Framework and Molecular Signatures for the Main Clades of the Phylum Actinobacteria

Gao

Gupta

2012

Microbiol Mol Biol Rev

243

237

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SUMMARY The phylum Actinobacteria harbors many important human pathogens and also provides one of the richest sources of natural products, including numerous antibiotics and other compounds of biotechnological interest. Thus, a reliable phylogeny of this large phylum and the means to accurately identify its different constituent groups are of much interest. Detailed phylogenetic and comparative analyses of >150 actinobacterial genomes reported here form the basis for achieving these objectives. In phylogenetic trees based upon 35 conserved proteins, most of the main groups of Actinobacteria as well as a number of their superageneric clades are resolved. We also describe large numbers of molecular markers consisting of conserved signature indels in protein sequences and whole proteins that are specific for either all Actinobacteria or their different clades ( viz ., orders, families, genera, and subgenera) at various taxonomic levels. These signatures independently support the existence of different phylogenetic clades, and based upon them, it is now possible to delimit the phylum Actinobacteria (excluding Coriobacteriia ) and most of its major groups in clear molecular terms. The species distribution patterns of these markers also provide important information regarding the interrelationships among different main orders of Actinobacteria . The identified molecular markers, in addition to enabling the development of a stable and reliable phylogenetic framework for this phylum, also provide novel and powerful means for the identification of different groups of Actinobacteria in diverse environments. Genetic and biochemical studies on these Actinobacteria -specific markers should lead to the discovery of novel biochemical and/or other properties that are unique to different groups of Actinobacteria .

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Section: Molecular Signatures Of Corynebacterium and The Corynebactermentioning

confidence: 99%

Phylogenetic Framework and Molecular Signatures for the Main Clades of the Phylum Actinobacteria

Gao

Gupta

2012

Microbiol Mol Biol Rev

243

237

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“…The orientation and ordering of these contigs was performed using BLAST (blastN) software to map the contigs against the FRC41 reference genome (8). Therefore, the BLAST results, the multi-FASTA files containing the contigs, and the FASTA files that contained the reference sequence were entered into the Graphical Contig Analyzer for All Sequencing Platforms software (G4ALL; http://g4all.sourceforge.net/) to manually curate and extend the contigs and generate the genome scaffold with gaps.…”

mentioning

confidence: 99%

Genome Sequence of the Corynebacterium pseudotuberculosis Cp316 Strain, Isolated from the Abscess of a Californian Horse

et al. 2012

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The bacterium Corynebacterium pseudotuberculosis is of major veterinary importance because it affects livestock, particularly sheep, goats, and horses, in several countries, including Australia, Brazil, the United States, and Canada, resulting in significant economic losses. In the present study, we describe the complete genome of the Corynebacterium pseudotuberculosis Cp316 strain, biovar equi, isolated from the abscess of a North American horse.

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“…longum BBMN68, sequence accession CP002286 [131] Corynebacterium pseudotuberculosis I19, sequence accession CP002251 [132] Janibacter sp. HTCC2649, sequence accession AAMN00000000 [133] Microbacterium testaceum StLB037, sequence accession AP012052 [134] Mycobacterium bovis BCG, sequence accession later [135] Nocardioides sp.…”

Section: Phylum Tenericutesmentioning

confidence: 99%

Genome sequences published outside of Standards in Genomic Sciences, January – June 2011

Nelson

2011

Stand. Genomic Sci.

122

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Complete Genome Sequence of Corynebacterium pseudotuberculosis I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis

Cited by 47 publications

References 11 publications

Phylogenetic Framework and Molecular Signatures for the Main Clades of the Phylum Actinobacteria

Phylogenetic Framework and Molecular Signatures for the Main Clades of the Phylum Actinobacteria

Genome Sequence of the Corynebacterium pseudotuberculosis Cp316 Strain, Isolated from the Abscess of a Californian Horse

Genome sequences published outside of Standards in Genomic Sciences, January – June 2011

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