We
describe the plasma chemistry in a helium flowing atmospheric
pressure afterglow (FAPA) used for analytical spectrometry, by means
of a quasi-one-dimensional (1D) plasma chemical kinetics model. We
study the effect of typical impurities present in the feed gas, as
well as the afterglow in ambient humid air. The model provides the
species density profiles in the discharge and afterglow regions and
the chemical pathways. We demonstrate that H, N, and O atoms are formed
in the discharge region, while the dominant reactive neutral species
in the afterglow are O3 and NO. He* and He2*
are responsible for Penning ionization of O2, N2, H2O, H2, and N, and especially O and H atoms.
Besides, He2
+ also contributes to ionization
of N2, O2, H2O, and O through charge
transfer reactions. From the pool of ions created in the discharge,
NO+ and (H2O)3H+ are the
dominant ions in the afterglow. Moreover, negatively charged clusters,
such as NO3H2O– and NO2H2O–, are formed and their pathway
is discussed as well. Our model predictions are in line with earlier
observations in the literature about the important reagent ions and
provide a comprehensive overview of the underlying pathways. The model
explains in detail why helium provides a high analytical sensitivity
because of high reagent ion formation by both Penning ionization and
charge transfer. Such insights are very valuable for improving the
analytical performance of this (and other) ambient desorption/ionization
source(s).