“…It is known that BACE1 active site is large consisting of subsites called pockets. There are S1 pocket which has close proximity with S3 are hydrophobic region composed of Leu30, Phe108, Ile110, Ile118, and Trp115 residues; the S2 and S4 are site exposed to hydrophilic residues such as Lys9, Ser10, Thr72, Gln73, Thr231, Thr232, Arg235, Arg307, and Lys321; the S3' and S4' composed of Pro70, Thr72, Glu125 Arg128, Arg195, and Trp197 residues; then next to S4' are S2' subsites which composed of hydrophobic and amphipathic residues such as Ser35, Val69, Tyr71, Ile126, and Tyr198; also the center of the active site, the S1' subsite, contains the catalytic dyad of Asp32/Asp238 and two hydrophobic residues of Ile226 and Val 332 [10].…”