The work proposes the technology for an automatic implementation of the soil sampling by means of underwater multilink manipulators which are attached to submergible autonomous and remotely controlled vehicles. This technology includes the strategy of the safe approaching of a vehicle to a sea bottom surface, and also the formation of manipulator trajectories for the efficient soil sampling by hermetically sealed tubes and soil scoops. The results of sea tests are presented for the study of the working capacity of the proposed technology.