The controlled adsorption of alkanethiol on a metal surface is crucial for the fabrication of molecular sensors and organic electronics. Control of a molecular conformation and an orientation on the surface is highly required to attain high charge carrier mobility of a plastic circuit. 1 A self-assembled monolayer (SAM) of alkanethiol is known as a highly ordered monolayer, and a patterned SAM has been fabricated for bioelectronics with a microcontact printing method. 2 Another method to control the molecular conformation and the orientation is thought to be the application of an external force.Any particles are magnetized under magnetic field gradients, and a magnetic force works on the particles. A magnetic force was applied to migration analysis of micro-particles in solution and in air, [3][4][5][6][7][8][9][10] utilizing the proportionality between the magnetic force and the particle's magnetic susceptibility. Although a magnetic force is expected to be used as a non-contact and controllable force on a single micro-particle or molecular monolayer, serious difficulties exist in applications to diamagnetic organic molecules, because of the small magnetic susceptibility. Then, the use of magnetic particles (MPs) possessing a high magnetic susceptibility is promising for the application of magnetic forces on an organic molecule and a monolayer. The present study demonstrates the effects of magnetic forces on the conformation of cysteamine linking a MP and a silver colloid, by means of surface-enhanced Raman scattering (SERS) spectroscopy.Silver nitrate (99.9999%, Aldrich), tri-sodium citrate dehydrate (Nacalai Tesque, Inc., Japan), (3-aminopropyl)-trimethoxysilane (APTMS, 97%, Aldrich), glutaraldehyde (25%, Wako Pure Chemical Industries, Ltd., Japan), and cysteamine hydrochloride (98%, Sigma) were used as received. Super-paramagnetic amine-terminated particles (mean diameter = 1 μm, BioMag Plus Amine, Polysciences, Inc., USA) were washed 10 times with distilled water. All solutions were prepared with distilled and deionized water by a Milli-Q system (resistivity ≈18.2 MΩ cm -1 ). A citrate-reduced silver colloid solution was prepared according to a Lee and Meisel method. 11 A silver nitrate solution (1.1 mM, 200 ml) mixed with a sodium citrate solution (1% (w/w), 4 ml) was refluxed for 90 min. A glass plate (26 × 30 mm 2 ) was chemically modified with APTMS. A silver colloid solution (300 μl) was deposited on an APTMS activated plate for 1 night, and then washed with distilled water.The washed amine-terminated magnetic particles (MPs) were activated with 5% glutaraldehyde solution by shaking for 2 h. The activated MP solution was then added to a 17.6 mM cysteamine solution and shaken for 1 h. The MP solution was washed 20 times with distilled water to remove any unreacted cysteamine (final residue ≈6 pM), and deposited onto a silver colloid plate for 2 h. The sample plate was washed with distilled water just before measurements.Magnetic field gradients generated by two permanent magnets induced a magnetic force...