The
possibility to target noncanonical guanine structures with
specific ligands for therapeutic purposes inspired numerous theoretical
and experimental investigations of a guanine quartet and its stacked
composites. In this work, we employed the interacting quantum atoms
methodology to study interactions among different fragments in complexes
composed of a guanine quartet and alkali (Li+, Na+, K+) or alkaline earth (Be2+, Mg2+, Ca2+) cations in vacuo: metal–quartet interaction,
influence of the cation on guanine–guanine interaction, as
well as hydrogen bond cooperativity in the guanine quartet and its
complexes with metal ions. Interestingly, although the presence of
a cation intensifies interaction among guanine molecules, it lowers
their binding energy because of notable quartet’s distortion
which is responsible for guanines’ substantial deformation
energy. This phenomenon is particularly pronounced with Be2+ which, out of the six analyzed cations, enhances hydrogen bond cooperativity
to the greatest extent.