2016
DOI: 10.1007/s10815-016-0822-1
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Copy number variation analysis reveals additional variants contributing to endometriosis development

Abstract: Purpose Endometriosis is a gynecological disease influenced by multiple genetic and environmental factors. The aim of the current study was to use SNP-array technology to identify genomic aberrations that may possibly contribute to the development of endometriosis. Methods We performed an SNP-array genotyping of pooled DNA samples from both patients (n = 100) and controls (n = 50). Copy number variation (CNV) calling and association analyses were performed using PennCNV software. MLPA and TaqMan Copy-Number as… Show more

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Cited by 14 publications
(7 citation statements)
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“…Using single-nucleotide polymorphism (SNP) array technology, a 2017 publication 31 describes genomic aberrations linked to the development of endometriosis. These investigators performed SNP array genotyping of pooled DNA samples from 100 patients with endometriosis and 50 controls.…”
Section: Diagnosismentioning
confidence: 99%
“…Using single-nucleotide polymorphism (SNP) array technology, a 2017 publication 31 describes genomic aberrations linked to the development of endometriosis. These investigators performed SNP array genotyping of pooled DNA samples from 100 patients with endometriosis and 50 controls.…”
Section: Diagnosismentioning
confidence: 99%
“…Mutations in TP53 [ 96 , 97 ] KRAS [ 30 , 98 ], PTEN [ 94 ], PIK3CA [ 99 , 100 ], and ARID1A gene regions [ 54 , 57 ] have been described. Loss of expression of mismatch repair enzymes [ 101 ], microsatellite instability [ 102 ], and tissue-specific gene copy-number changes [ 103 , 104 ], may also be seen in endometriosis lesions. LOH in endometriosis at known oncogenic loci is also frequently seen [ 94 , 105 110 ].…”
Section: Development Of Eaoc From Endometriosismentioning
confidence: 99%
“…Mutations in Kirsten rat sarcoma (KRAS) [93,94], tumor protein p53 gene (TP53) [95,96], phosphatidylinositol-4,5-bisphosphate 3-kinase (PIK3CA) [97,98], phosphatase and tensin homolog (PTEN) [99], and AT-rich interactive domain-containing protein 1A (ARID1A) gene regions [100,101] have been described. Microsatellite instability [102], loss of expression of mismatch repair enzymes [103], and tissue-specific gene copy-number changes [104,105] may also be seen in endometriosis lesions. Loss of heterozygosity resulting in PTEN loss may be an early driver event in the genesis of endometriosis-associated ovarian carcinomas arising from endometriosis [99,106].…”
Section: Genes Involved In Endometriosis Developmentmentioning
confidence: 99%