The Coronavirus has spread across the world and infected millions of people, causing devastating damage to the public health and global economies. To mitigate the impact of the coronavirus a reliable, fast, and accurate diagnostic system should be promptly implemented. In this study, we propose EpistoNet, a decision tree-based ensemble model using two mixtures of discriminative experts to classify COVID-19 lung infection from chest X-ray images. To optimize the architecture and hyper-parameters of the designed neural networks, we employed Epistocracy algorithm, a novel hyper-heuristic evolutionary method. Using 2,500 chest X-ray images consisting of 1,250 COVID-19 and 1,250 non-COVID-19 cases, we left out 500 images for testing and partitioned the remaining 2,000 images into 5 different clusters using K-means clustering algorithm. We trained multiple deep convolutional neural networks on each cluster to help build a mixture of strong discriminative experts from the top-performing models supervised by a gating network. The final ensemble model obtained 95% accuracy on COVID-19 images and 93% accuracy on non-COVID-19. The experimental results show that EpistoNet can accurately, and reliably be used to detect COVID-19 infection in the chest X-ray images, and Epistocracy algorithm can be effectively used to optimize the hyper-parameters of the proposed models.