Techniques for the characterization of two boronic acid peptides as their cyclic boronate ester derivatives by positive-ion ammonia chemical ionization (CI) and positive-ion liquid secondary ionization (LSIMS) are described and results presented. These techniques avoid the complications introduced by the thermally induced processes that boronic acids may undergo when the mass spectrometric characterizations of free boronic acids are attempted. Derivatizations for CI analysis were accomplished via a simple benchtop method using several polyfunctional nucleophilic derivatizing agents (ethylene glycol, glycerol, et al.), while derivatizations for LSIMS analysis were accomplished via both benchtop and previously established in situ methods using the same derivatizing agents. Certain previously held misconceptions about the LSIMS mass spectrometry of boronic acids are examined.The preparation of cyclic boronate esters has long been a useful technique for the characterization of polyfunctional nucleophilic compounds by gas chromatography (GC) and gas chromatography/electron ionization mass spectrometry (GC/EIMS). This method was first applied to 1,2-diols and simple sugars in order to facilitate the characterization of these compounds by GC 1 (Figure 1). The technique has since been applied to the GC and GC/MS characterization of many polyfunctional nucleophilic compounds. 2-8 Cyclic esters, typically n-butylboronates or benzeneboronates, have been preferred as derivatives over dialkyl esters, since the dialkyl esters are more hydrolytically unstable. 9