Viral replication requires the help of host cell factors, whose species specificity may affect viral tropism. On the other hand, there exist host factors that restrict viral replication. The anti-viral system mediated by some of these restriction factors, which is termed intrinsic immunity and is distinguished from conventional innate and adaptive immunity, has been described as playing an important role in making species-specific barriers against viral infection. Here, we describe the current progress in understanding of such restriction factors against retroviral replication, focusing on TRIM5α and APOBEC, whose anti-retroviral effects have recently been recognized. Additionally, we mention cyclophilin A, which is essential for HIV-1 replication in human cells and may affect viral tropism. Understanding of these host factors would contribute to identification of the determinants for viral tropism. List of Abbreviations: A, adenine; agmApo3G, African green monkey Apo3G; Ala, alanine; Apo3G, APOBEC3G; APOBEC, apolipoprotein B mRNAediting enzyme-catalytic subunit; CA, capsid; CypA, cyclophilin A; CsA, cyclosporine A; G, guanine; Gly, glycine; hApo3G, human Apo3G; HIV-1, human immunodeficiency virus type 1; Ile, isoleucine; Lv-1, lentivirus susceptibility factor 1; MLV, murine leukemia virus; OWM, old world monkey; Pro, proline; Ref-1, restriction factor 1; SIVagm, African green monkey simian immunodeficiency virus; SIVmac, simian immunodeficiency virus mac; TRIM5, tripartite interaction motif 5; TRIM5α, tripartite interaction motif 5 α; Vif, virus infectivity factor. product, Fv-1, occurs after viral entry into the cells but before the integration step during the viral replication cycle (8). The two main alleles of Fv-1, Fv-1 n and Fv-1 b , confer resistance to replication of B-tropic and N-tropic MLV respectively (9). Although the precise mechanism of Fv-1-mediated restriction remains unclear, comparison of viral genome sequences between B-tropic and N-tropic MLV has indicated the 110 th amino acid in Gag CA as the viral determinant for the tropism, suggesting that MLV Gag CA is the target for the host factor involved in this restriction (10, 11).
Key wordsRef-1, which shows a similar pattern of inhibition of retroviral replication with Fv-1, is known as a restriction factor in mammalian cells apart from murine cells. The viral determinant for Ref-1-mediated restriction has been 318