Recipients of ex vivo T-cell depleted (TCD) HCT are at risk of infection by double stranded (ds) DNA viruses. We report rates of dsDNA viremia, end-organ disease (EOD), infection-related mortality, and overall survival (OS) in a contemporary cohort of adult TCD HCT recipients routinely monitored for cytomegalovirus (CMV), adenovirus (ADV), human herpesvirus 6 (HHV6) and Epstein-Barr virus (EBV). Health care utilization in the first 6 months post HCT was compared between patients with dsDNA viremia versus no viremia. Observational study of adult patients with acute leukemia and myelodysplastic syndrome who received CD34+ selected, peripheral blood HCT at Memorial Sloan Kettering Cancer Center from March 2012 through December 2014. Patients were prospectively monitored by quantitative polymerase chain (qPCR) assays for CMV, ADV, HHV6 and EBV in whole blood or plasma. The cumulative incidence of viremia(s) at day +180, end-organ disease (EOD) at 1 year, and overall survival at 1 year were estimated by the Kaplan-Meier method and compared by the log-rank test among patient with and without viremia/EOD. Standardized incidence ratios (SIR) were used to compare overall length of hospital stay (LOS), number of readmissions after HCT and length of readmissions through day +180. Of 156 patients, 96 (62%) were CMV recipient seropositive. Patients received grafts from matched related 42 (27%), matched unrelated 86 (55%) or mismatched 28 (18%) donors. Overall, 132 (85%) patients had ≥1viremia, and 52 (33%) patients had ≥2 viremias by day +180. The cumulative incidences for CMV, HHV6, ADV, and EBV viremia were 44%, 61%, 7% and 16%, respectively with median [interquartile range(IQR)] time of onset 28 (25–33), 33(25–47), 60(19–84), and 79 (54–106) days post HCT, respectively. Twenty-eight (18%) patients developed EOD by ds DNA viruses at 1 year post HCT. Treatment for CMV accounted for 91% total antiviral treatment-days. Compared to patients with no viremia, patients with CMV viremia, HHV6 viremia, or ≥ 2 viremias experienced longer LOS (P<0.001) and a higher number of readmissions (P<0.001) by day+ 180. OS at 1-year was 79% and similar between patients with or without ds DNA viremias. EOD was associated with lower 1-year OS (63.4%) vs without EOD (81.1%) (P=0.02). Of 33 patients that died, 10 died due to infection and 7 of the 10 infection-related deaths were due to dsDNA viruses. Viremia by dsDNA viruses occurred in 85% of CD34+ HCT recipients by day +100 and 33% of patients experienced ≥2 viremias by day +180. CMV accounted for the majority of antiviral use. CMV, HHV6 or ≥2 viremias were associated with more readmissions and longer LOS. Overall, one-year OS was 78%. EOD by dsDNA viruses was associated with decreased one-year OS. Infections by ds DNA viruses pose a substantial burden after TCD HCT.