Denitrification fractionates N and O isotopes of nitrate following a ratio independent of carbon sources in freshwaters

Abstract

The stable isotope technique has been used in tracking nitrogen cycling processes, but the isotopic characteristics are influenced by environmental conditions. To better understand the variability of nitrate isotopes in nature, we investigated the influence of organic carbon sources on isotope fractionation characteristics during microbial denitrification. Denitrifying cultures were inoculated with freshwater samples and enriched with five forms of organic compounds, that is, acetate, citrate, glucose, cellobiose, and leucine. Though the isotope enrichment factors of nitrogen and oxygen (15ε and 18ε) changed with carbon sources, 18ε/15ε always followed a proportionality near 1. Genome‐centred metagenomics revealed the enrichment of a few populations, such as Pseudomonas, Enterobacter, and Atlantibacter, most of which contained both NapA‐ and NarG‐type nitrate reductases. Metatranscriptome showed that both NapA and NarG were expressed but to different extents in the enrichments. Furthermore, isotopic data collected from a deep reservoir was analysed. The results showed δ18O‐ and δ15N‐nitrate did not correlate in the surface water where nitrification was active, but 18ε/15ε followed a proportionality of 1.05 ± 011 in deeper waters (≥ 12 m) where denitrification controlled the nitrate isotope. The independence of 18ε/15ε from carbon sources provides an opportunity to determine heterotrophic denitrification and helps the interpretation of nitrate isotopes in freshwaters.

Unraveling the mechanism of assimilatory nitrate reduction and methane oxidation by Methylobacter sp. YHQ through dual N-O isotope analysis and kinetic modeling

“…N and O isotopes are useful tools for differentiating sources, and evaluating biogeochemical transformation pathways of contaminant nitrate (Li et al 2023). Because heavier isotopes (e.g., 15 N and 18 O) react slower than lighter ones (e.g., 14 N and 16 O) during assimilatory nitrate reduction, the remaining nitrate becomes progressively enriched with heavy isotopes (Granger et al 2004).…”