BACKGROUND: Human polyomaviruses (HPyVs), like herpesviruses, cause persistent infection in a large part of the population. In immunocompromised and elderly patients, PyVs cause severe diseases such as nephropathy (BK polyomavirus [BKPyV]), progressive multifocal leukoencephalopathy (JC polyomavirus [JCPyV]), and skin cancer (Merkel cell polyomavirus [MCPyV]). Like cytomegalovirus, donor-derived PyV can cause disease in kidney transplant recipients. Possibly blood components transmit PyVs as well. To study this possibility, as a first step we determined the presence of PyV DNA in Dutch blood donations. STUDY DESIGN AND METHODS: Blood donor serum samples (n = 1016) were analyzed for the presence of DNA of 14 HPyVs using HPyV species-specific quantitative polymerase chain reaction (PCR) procedures. PCR-positive samples were subjected to confirmation by sequencing. Individual PCR findings were compared with the previously reported PyV serostatus. RESULTS: MC polyomavirus DNA was detected in 39 donors (3.8%), JCPyV and TS polyomavirus (TSPyV) DNA in five donors (both 0.5%), and HPyV9 DNA in four donors (0.4%). BKPyV, WU polyomavirus (WUPyV), HPyV6, MW polyomavirus (MWPyV), and LI polyomavirus (LIPyV) DNA was detected in one or two donors. Amplicon sequencing confirmed the expected product for BKPyV, JCPyV, WUPyV, MCPyV, HPyV6, TSPyV, MWPyV, HPyV9, and LIPyV. For JCPyV a significant association was observed between detection of viral DNA and the level of specific IgG antibodies. CONCLUSION: In 5.4% of Dutch blood donors PyV DNA was detected, including DNA from pathogenic PyVs such as JCPyV. As a next step, the infectivity of PyV in donor blood and transmission via blood components to immunocompromised recipients should be investigated.ABBREVIATIONS: BKPyV = BK polyomavirus; Ct = cycle threshold; HPyV(s) = human polyomaviruses; JCPyV = JC polyomavirus; LIPyV = LI polyomavirus; KIPyV = KI polyomavirus; MCPyV = Merkel cell polyomavirus; MWPyV = MW polyomavirus; NJPyV = NJ polyomavirus; PML = progressive multifocal leukoencephalopathy; PyV = polyomavirus; qPCR = quantitative polymerase chain reaction; STLPyV = STL polyomavirus; TS = trichodysplasia spinulosa; TSPyV = TS polyomavirus; WUPyV = WU polyomavirus.From the * Codetection of multiple PyVs in a single donor counts as one for the total number of positive donors. † Total number of true-positive donors based on positive PCR results with Ct value of less than 40 and sequence confirmation of at least one PCR product.‡ Median viral load.