<p><strong>Abstract.</strong> Diatoms tend to dominate the Arctic spring bloom, a key event in the ecosystem. Large sinking of diatoms is expected at the end of the bloom driven by deteriorated cell status associated to nutrients (silicon) depletion. However, there are few reports on the status of diatoms' health during Arctic blooms and its possible role on sedimentary fluxes. Here we quantify, using the Bottle-Net, Arctic diatom stocks below and above the photic layer and assess their cell health status. The communities were sampled around the Svalbard Islands and encompassed a broad diversity of conditions and bloom stages. About 1/4 (mean&#177;SE 24.2 &#177; 6.7&#8201;%) of the total water column (max. 415&#8201;m) diatom stock was found below the photic layer, indicating significant sinking of diatoms in the area. The fraction of living diatom cells in the photic layer averaged 59.4 &#177; 6.3&#8201;% but showed the highest percentages (72.0&#8201;%) in stations supporting active blooms. In contrast, populations below the photic layer were dominated by dead cells (20.8 &#177; 4.9&#8201;% living cells). The percentage of diatom&#8217;s stock found below the photic layer was negatively related to the percentage of living diatoms in the surface, indicating that healthy populations remained in the surface layer. An experiment on board in a tall (1.35&#8201;m) sedimentation column confirmed that dead diatom cells from the Arctic community sink faster that living ones. Also, diatoms cell mortality increased in darkness, showing an averaged half life of 1.025 &#177; 0.075&#8201;d<sup>&#8722;1</sup>. The results conform to a conceptual model where diatoms grow during the bloom until silicic acid stocks are depleted, and support a link between diatom cell health status and sedimentation fluxes in the Arctic. Healthy arctic phytoplankton communities remained at the photic layer, whereas dying communities exported a large fraction of the biomass to the aphotic zone, fuelling carbon sequestration and benthic ecosystems.</p>