Draft Genome Sequence of Pantoea agglomerans CPHN2, a Potential Plant-Growth-Promoting Endophyte

Kumar, Pradeep; Chauhan, Varsha; Dang, Amita Suneja; Kumar, Ajit; Suneja, Pooja

doi:10.1128/mra.00192-22

Cited by 2 publications

(1 citation statement)

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“…The whole genome of P. agglomerans CPHN2 has been deposited in GenBank under Accession nos. CP098412 , CP098413 for plasmids, and CP098414 for genome and is annotated by a prokaryotic genomic annotation pipeline (PGAP) (Kumar et al, 2022 ) (Tatusova et al, 2016 ; Kumar et al, 2022 ). Bio Project accession number PRJNA811747 (Sequence Read Archive Accession No.…”

Section: Data Availability Statementmentioning

confidence: 99%

Whole genome analysis for plant growth promotion profiling of Pantoea agglomerans CPHN2, a non-rhizobial nodule endophyte

Kumar

Rani²,

Dahiya³

et al. 2022

Front. Microbiol.

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Reduced agricultural production as well as issues like nutrient-depleted soils, eutrophication, and groundwater contamination have drawn attention to the use of endophyte-based bioformulations to restore soil fertility. Pantoea agglomerans CPHN2, a non-rhizobial nodule endophyte isolated from Cicer arietinum, exhibited a variety of plant growth-promoting traits. In this study, we used NextSeq500 technology to analyze whole-genome sequence information of this plant growth-promoting endophytic bacteria. The genome of P. agglomerans CPHN2 has a length of 4,839,532 bp and a G + C content of 55.2%. The whole genome comprises three different genomic fractions, comprising one circular chromosome and two circular plasmids. A comparative analysis between P. agglomerans CPHN2 and 10 genetically similar strains was performed using a bacterial pan-genome pipeline. All the predicted and annotated gene sequences for plant growth promotions (PGPs), such as phosphate solubilization, siderophore synthesis, nitrogen metabolism, and indole-3-acetic acid (IAA) of P. agglomerans CPHN2, were identified. The whole-genome analysis of P. agglomerans CPHN2 provides an insight into the mechanisms underlying PGP by endophytes and its potential applications as a biofertilizer.

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Section: Data Availability Statementmentioning

confidence: 99%