Because sensory signals often evolve rapidly, they could be instrumental in the emergence of reproductive isolation between species. However, pinpointing their specific contribution to isolating barriers, and the mechanisms underlying their divergence, remains challenging. Here we demonstrate sexual isolation due to divergence in chemical signals between members of the Drosophila americana group, dissect its underlying phenotypic and genetic mechanisms, and propose a model of its evolutionary history. Mating trials revealed complete sexual isolation between Drosophila novamexicana males and Drosophila americana texana females, as well as more moderate bi-directional isolation between D. americana subspecies. Mating behavior recordings indicate D. a. texana males have the highest courtship efficiency and, unlike males of the other two species, are accepted by females of all species. Quantification of cuticular hydrocarbon (CHC) profiles, chemosensory signals that are used for species recognition and mate finding in Drosophila, shows that D. a. texana differs from the other two species primarily on the basis of compound carbon chain-length. Moreover, manipulation of male CHC composition via heterospecific perfumingâspecifically perfuming D. novamexicana males with D. a. texana malesâabolishes their sexual isolation from D. a. texana females. Evaluation of candidate genes for patterns of gene expression reveals a single geneâelongase CG17821âwith patterns consistent with a causal role in CHC differences between species. Sequence comparisons indicate D. novamexicana and D. a. americana share a derived CG17821 truncation mutation that could also contribute to their shared âshortâ CHC phenotype. We present an evolutionary model for the origin and spread of this allele and the consequences for CHC divergence and sexual isolation in this group.