In the present study, we have investigated the effect of post-welding heat treatment (PWHT) of quenching and tempering (QT) on the microstructure and mechanical properties of welded boron steel joints processed using laser-arc hybrid welding on two commercial filler materials, SM80 (Type-I) and ZH120 (Type-II). The microstructure and mechanical properties of the weld joints were characterized via optical microscopy, Vickers microhardness, and the uniaxial tensile test. The macrostructure of the weld joint was composed of a fusion zone (FZ), heat-affected zone (HAZ), and base metal zone (BMZ). After the QT-PWHT, the QT specimens revealed the V-shape hardness distribution across the weld joint, while the as-welded specimen exhibited the M-shape hardness distribution. As a result, the QT specimens revealed the premature fracture with little reduction in the area at the interface between the HAZ and FZ, while the as-welded specimen exhibited the local necking and rupture in the BMZ. In addition, the Type-II filler material with a greater value of equivalent carbon content was rarely influenced by the tempering, maintaining its hardness in the as-quenched status, while the Type-I filler material showed a gradual decrease in hardness with the tempering time. The results demonstrate that the Type-II weld joint outperformed the Type-I weld joint in terms of the structural integrity of welded parts.