Oats as a source of antioxidants and complex polysaccharides are currently an important component in human nutrition. Producing healthy, safe and high-quality grain for this purpose depends upon growing oat cultivars with improved resistance to diseases caused by Fusarium spp. producing mycotoxins. Thirteen cultivars of naked (Ábel, Detvan, Izák and Avenuda) and covered (Zvolen, Auron, Atego, Flämingsstern, Kanton, Viktor, Zlaťák, Euro and Ardo) oats were inoculated with conidial suspensions of F. culmorum isolate in the field at flowering in 2006 and 2007. After harvest, reduction in thousand-kernel weight (R-TKW), reduction in panicle-kernel weight (R-PKW), and deoxynivalenol (DON) content in grain and hulls were determined. The ELISA immunochemical method was employed for the quantitative analyses of DON. Values of yield components (R-TKW; R-PKW) were 35.4% and 31.1% lower in dehulled covered oats than in naked oat cultivars. The DON accumulation was highest in hulls as compared with DON content in kernels of naked and covered oat cultivars. Accumulation of DON in dehulled covered cultivars was 34.4% lower than the average contamination in naked cultivars. When the cultivars were compared, there were positive correlations between R-TKW and R-PKW and also between DON content and R-PKW. With a view to growing oat cultivars for production of cereal foods, it was shown that dehulling of covered oat grain resulted in substantially reduced DON content.