To cite this version:A. Vainio, T. Kaijalainen, A. J. Hakanen, A. Virolainen. Prevalence of pilus-encoding islets and clonality of pneumococcal isolates from children with acute otitis media. We characterized prevalence of pilus islets 1 (PI-1) and 2 (PI-2) and clonality of 25 Streptococcus pneumoniae isolates taken from children with acute otitis media (AOM) to 26 study the association between pilus existence and AOM disease potential prior to 27 pneumococcal conjugate vaccine and increased antimicrobial resistance. 28The study material consisted of 75 pneumococcal isolates cultured from middle ear fluid 29 and/or nasopharyngeal aspirate of 56 children with AOM in Finland during 1990Finland during -1992 Isolates were studied for antimicrobial susceptibility and were serotyped, genotyped by 31 multilocus sequence typing (MLST), and tested for the presence of pneumococcal PI-1 32 and PI-2 genes. 33All isolates were susceptible to penicillin, 14 different serotypes were found, and 20% of 34 the isolates were positive for PI-1 genes. PI-2 genes were not found. MLST showed high 35 heterogeneity: 52 AOM isolates belonged to 18 known Clonal Complexes (CC). PI-1 was 36 associated with serotypes 6A, 6B, and 9V, and genotype CC490. 37In the time prior to PCV7 and increased antimicrobial resistance, pneumococcal AOM 38 isolates carried PI-1 genes in rather low prevalence. PI-2 genes were not detected. PI-1 39 was related with serotype rather than genotype. The importance of PI-1 in AOM 40 infections and its association with the spread of antimicrobial resistance requires further 41 research. 42 6