Nitrogen oxides (NOx) contribute much to acid rain, photochemical smog, and the depletion of tropospheric ozone. A novel, small‐pore Cu‐exchanged chabazite (Cu‐CHA) zeolite, Cu‐SAPO‐44, was first studied for the selective catalytic reduction of NOx with ammonia (NH3‐SCR), and exhibits excellent activity and N2 selectivity over the wide temperature window from 200–550 °C. The Cu content in Cu‐SAPO‐44 plays a significant role in the NH3‐SCR reactions. Two kinds of isolated Cu2+ species inside the large cages and in the six‐membered rings of the CHA structure were verified as the active sites, which are responsible for the low‐temperature and high‐temperature activity, respectively. Cu‐SAPO‐44 is shown to be a promising candidate as a SCR catalyst for deNOx with great potential in after‐treatment systems for either mobile or stationary sources.