Abstract:Electrohydrodynamics is crucial in many nanofluidic and biotechnological applications. In such small scales, the complexity due to the coupling of fluid dynamics with the dynamics of ions is increased by the relevance of thermal fluctuations. Here, we present a mesoscale method based on the Dissipative Particle Dynamics (DPD) model of the fluid. Two scalar quantities, corresponding to the number of positive and negative ions carried by each DPD particle, are added to the standard DPD formulation. We introduced… Show more
“…In this study, we employed Brownian simulations to simulate the exit of a particle from a nanocavity. The Brownian model has computational cost much lower compared with other coarse grained approaches and is able to include thermal fluctuation such as DPD [56][57][58][59][60] or MPCD. 61,62 This allowed us to explore the effects of a wide range of parameters on particle trajectories within a confined volume.…”
Nanopores and nanocavities are promising single molecule tools for investigating the behavior of individual molecules within confined spaces. For single molecule analysis, the total duration of time the analyte remains...
“…In this study, we employed Brownian simulations to simulate the exit of a particle from a nanocavity. The Brownian model has computational cost much lower compared with other coarse grained approaches and is able to include thermal fluctuation such as DPD [56][57][58][59][60] or MPCD. 61,62 This allowed us to explore the effects of a wide range of parameters on particle trajectories within a confined volume.…”
Nanopores and nanocavities are promising single molecule tools for investigating the behavior of individual molecules within confined spaces. For single molecule analysis, the total duration of time the analyte remains...
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