“…To examine the binding of nuclear extracts from infected cells to the labeled NF-B probe, 5 l of lysate (mock, rSV5, rSV5⌬SH, or rSV5⌬SHϩMuV-SH infected), the NF-B probe (about 40,000 cpm), 2 l of 10ϫ EMSA buffer (25 mM HEPES, pH 7.5, 60 mM NaCl, 9% glycerol, 1 mM EDTA, 7.5 mM DTT, 50 mM MgCl 2 ), 2 l of poly(dI-dC) (1 g/l), and water up to 20 l were incubated together at room temperature for 30 min. As controls, unlabeled NF-B oligomers and nonspecific competitor AP-1 primers (AP1 5Ј, 5Ј-GGG GAA GCT TTG ACT CA-3Ј) (25) were added to nuclear lysates from mock-, rSV5-, rSV5⌬SH-, or rSV5⌬SHϩMuV-SH-infected cells. Nuclear extracts and labeled oligomer mix-…”