Let G n,r,s denote a uniformly random r-regular s-uniform hypergraph on the vertex set {1, 2, . . . , n}. We analyse the asymptotic distribution of Y G , the number of spanning trees in G, when r, s 2 are fixed constants, (r, s) = (2, 2), and the necessary divisibility conditions hold. Greenhill, Kwan and Wind (2014) investigated the graph case (s = 2), providing an asymptotic formula for the expected value of Y G for any fixed r 3, which was previously only known up to a constant factor. They also found the asymptotic distribution of Y G for random cubic graphs (r = 3), and made a conjecture for arbitrary r 4. Here we prove this conjecture and extend the analysis to hypergraphs. When s 5 we prove a threshold result for the property that G n,r,s contains a spanning tree. We also calculate the asymptotic distribution of Y G for all fixed integers r, s 2 such that the probability that G n,r,s has a spanning tree tends to one as n grows.