Within the next five years the manufacture of large quantities of nanomaterials may lead to unintended contamination of terrestrial and aquatic ecosystems 1 . The unique physical, chemical and electronic properties of nanomaterials allow new modes of interaction with environmental systems that can have unexpected impacts 2,3 . Here, we show that gold nanorods can readily pass from the water column to the marine food web in three laboratory-constructed estuarine mesocosms containing sea water, sediment, sea grass, microbes, biofilms, snails, clams, shrimp and fish. A single dose of gold nanorods (65 nm length 3 15 nm diameter) was added to each mesocosm and their distribution in the aqueous and sediment phases monitored over 12 days. Nanorods partitioned between biofilms, sediments, plants, animals and sea water with a recovery of 84.4%. Clams and biofilms accumulated the most nanoparticles on a per mass basis, suggesting that gold nanorods can readily pass from the water column to the marine food web.The transport of contaminants to oceans through estuaries is often mediated by chemical and physical processes associated with mixing fresh water with sea water. As this region is also the habitat for many commercially and ecologically important shellfish and finfish, it could also be a critical point of nanomaterial contaminant entry into the marine food web. For example, salinity gradients, such as those found in tidal mixing zones, typically promote the flocculation and precipitation of organic matter and naturally occurring particulates 4,5 . Organic matter and particulates can be consumed by detritivores or shellfish, and they can also be a sink for anthropogenic material through burial in sediments 6 . At present little is known about the physicochemical behaviour of nanomaterial in the mixing zone, precluding prediction of their eventual environmental distribution. Measurement of nanomaterial distributions in model estuarine systems is a necessary first step towards the evaluation of the effects of nanoparticles on the environment.This study used a series of three replicate estuarine mesocosms as laboratories for measuring the behaviour of nanoparticles in complex environments. These systems are representative of Spartina (cordgrass) dominated estuaries and have been successfully used for estimating the coastal impact of several other contaminants, including atrazine, fipronil, endosulfan and nutrients (Fig. 1) [7][8][9][10] . In this study, three replicates of a complex ecosystem were constructed to model the edge of a tidal marsh creek. The systems were made up from natural, unfiltered sea water from Cherry Point Boat Landing on Wadmalaw Island, South Carolina, USA (salinity determined by conductivity and adjusted to 20‰ by the addition of deionized water) and contained a periodically submerged sediment tray in the primary tank and an attached reservoir for water storage (isolated with a screen) to simulate a tidal cycle [9][10][11] . Sediments were planted with Spartina alterniflora, 100 juvenile Mercenari...