Estimating Genetic Diversity in Durum and Bread Wheat Cultivars from Turkey using AFLP and SAMPL Markers

Altıntaş, Serdar; Toklu, Faruk; Kafkas, Salih; Kilian, Benjamin; Brandolini, Andrea; Özkan, Hakan

doi:10.1111/j.1439-0523.2007.01424.x

Cited by 63 publications

(51 citation statements)

References 38 publications

(44 reference statements)

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“…This high polymorphism with the use of AFLP and SRAP markers among the tested legume genotypes might be attributed to the use of more sensitive laser based genetic analyzer detection system. This most advanced system even may detect a difference of one per base pair between the amplicons (Tavoletti and Iommarini, 2007;Altintas et al, 2008). Moreover, for the differentiation of the relationship among various traits of legume genotypes, the molecular markers (AFLP and SRAP) were very useful.…”

Section: Discussionmentioning

confidence: 99%

Genetic Diversity and Field Performance of Mung Bean, Faba Bean and Lentil Genotypes in the Kingdom of Saudi Arabia

Alghamdi

Al-Faifi

Migdadi

et al. 2017

IJAB

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Grain legumes are grown for their high proteins and biological nitrogen fixation ability. In this study, 3 mung bean, 4 lentil and 20 faba bean genotypes from the Kingdom of the Saudi Arabia were evaluated for genetic diversity. There were significant differences in the morphological and molecular characteristics in the tested mung bean (Vigna radiata L.), lentil (Lens culinaris Medik.) and faba bean (Vicia faba L.) genotypes. The sequence-related amplified polymorphism (SRAP) and amplified fragments length polymorphism (AFLP) markers exhibited a considerable genetic diversity among the tested genotypes of all three legume crops. The genotypes differed for plant height, primary branches, pod length, pods per plant, grain per pod and 100-grain weight. All the tested genotypes of mung bean, lentil and faba bean differed in the number of alleles. Maximum number of alleles per primer combination was 112 in mung bean, 72 in lentil and 126 in faba bean.Polymorphism percentage of all the tested genotypes of the mung bean and lentil was 100% and in faba bean, it ranged from 97 to 100%. Existence of genetic diversity of these tested mung bean, lentil and faba bean genotypes offers opportunities to exploit favourable alleles for use in the breeding program aimed at yield improvement.

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Section: Discussionmentioning

confidence: 99%

Genetic Diversity and Field Performance of Mung Bean, Faba Bean and Lentil Genotypes in the Kingdom of Saudi Arabia

Alghamdi

Al-Faifi

Migdadi

et al. 2017

IJAB

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“…accessions, the use of molecular markers such as AFLPs (Andru et al, 2011) will be necessary as it was the case for many crops such as fonio (Adoukonou et al, 2007), wheat (Altintas et al, 2008), yam (Sonibare et al, 2010) and rice (Rajkumar et al, 2011).…”

Section: Resultsmentioning

confidence: 99%

Agromorphological characterization of Sesamum radiatum (Schum. and Thonn.), a neglected and underutilized species of traditional leafy vegetable of great importance in Benin)

Adéoti¹

2012

Afr. J. Agric. Res.

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Sesamum radiatum (Schum. and Thonn) is a traditional leafy vegetable of national importance in Benin. Although, it is cultivated and consumed in many regions of the country, it is still unfortunately neglected by scientific research. In order to fill in the knowledge gaps necessary for its varietal improvement, 16 accessions collected from different agro-ecological zones were characterized using 16 quantitative morphological traits. A significant variability was found among the accessions. Day to flowering, day to fruiting, total biomass, plant height, noose diameter, number of fruits per plant and number of seeds per fruit were some of the most discriminating parameters. Multivariate analysis (principal component analysis and cluster analysis) revealed four distinct agro-morphological groups of varying performance which will be highly useful in varietal improvement. Correlation analyses between descriptors revealed uniquely desired positive and negative relationships hence, indicating predictable success for eventual breeding program. To further investigate the genetic basis of the phenotypic diversity revealed among S. radiatum accessions, the use of molecular markers such as amplified fragment length polymorphisms (AFLPs) is recommended.

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“…The highest PIC for all accessions was found in the B genome (0.71) as compared to the A (0.68) and D genomes (0.63). In addition, SSR markers has been used to study genetic diversity of wheat cultivars in Argentina (Manifesto et al, 2001), Egypt (Salem et al, 2008), France (Roussel et al, 2004), Iran (Eivazi et al, 2008;Mohammadi et al, 2009), US (Mahmood et al, 2004;Fufa et al, 2005;Chao et al, 2007), and Turkey (Akkaya & Buyukunal-Bal, 2004;Altintas et al, 2008). However, genetic diversity of all bread wheat's that are cultivated in Iran, have not been evaluated by SSR markers.…”

Section: Introductionmentioning

confidence: 99%

Investigation of Genetic Diversity among Bread Wheat Cultivars (Triticum aestivum L.) Using SSR Markers

Drikvand¹,

Bihamta²,

Najafian³

et al. 2012

JAS

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The present study was conducted to understand the genetic diversity of bread wheat's that grown in Iran, and to evaluate polymorphism information content (PIC) of some wheat SSR primers. Experiment was done in the genomics Laboratory in Islamic Azad University, Khorramabad branch, Iran in 2012. Ninety-two bread wheat varieties were assayed to study the genetic diversity and polymorphism based on forty whole-genome SSR markers. Eighty alleles were identified and 2 alleles per locus were detected. The majority of SSR markers showed a high level of polymorphism. PIC values ranged from 0.12 (XBARC 148) to 0.80 (XBARC 54), with an average of 0.59 per primer, which indicates that markers were highly informative. According to similarity matrix, genetic similarity value ranged from 0.17 to 0.88. The lowest and highest genetic similarity were observed between 'Mihan' and 'Star' (No 31 and 57), 'Azadi' and 'Mahdavi' (No 4 and 6), respectively. Cluster analysis using the UPGMA method based on Jaccard coefficients was performed. Based on cluster analysis, 92 wheat cultivars were grouped in six clusters. Results indicated that Iranian grown wheat cultivars had high genetic diversity which could be exploited in wheat breeding programs.

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Estimating Genetic Diversity in Durum and Bread Wheat Cultivars from Turkey using AFLP and SAMPL Markers

Cited by 63 publications

References 38 publications

Genetic Diversity and Field Performance of Mung Bean, Faba Bean and Lentil Genotypes in the Kingdom of Saudi Arabia

Genetic Diversity and Field Performance of Mung Bean, Faba Bean and Lentil Genotypes in the Kingdom of Saudi Arabia

Agromorphological characterization of Sesamum radiatum (Schum. and Thonn.), a neglected and underutilized species of traditional leafy vegetable of great importance in Benin)

Investigation of Genetic Diversity among Bread Wheat Cultivars (Triticum aestivum L.) Using SSR Markers

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