This study aimed to utilize hybrid physics-based models that allow for a comprehensive evaluation of how solar–meteorological variables influence the fraction of absorbed photosynthetically active radiation (FAPAR). By integrating both physical and statistical approaches, these models provided a novel perspective on understanding the complex relationship between solar radiation and FAPAR dynamics. The integration of URE and CLC in studying ecosystem efficiency in the nations of China and India is crucial, owing to their interdependent nature. To achieve this, the coupled model intercomparison project phase 6 (CMIP6) was utilized, which involved interpolating data from the most recent five GCMs from the six-phase CMIP6. By integrating advanced modeling techniques with observational data, this innovative approach enabled a holistic assessment of the intricate connections between urban development, climate dynamics, and the productivity of surrounding ecosystems in these regions. The reported decline in FAPAR productivity in China and India highlights the growing concern over the impact of climate change on the health and resilience of vegetation. China experienced negative changes of −1.425, −0.414, and −0.018, while India reported negative changes of −2.463, 2.199, and 2.915 under different scenarios. Interestingly, despite these variations, both countries observed similar tidal variations in their seasonal bases, suggesting a consistent pattern in the fluctuations of vegetation productivity throughout the year. The authors of this study collected and analyzed extensive data on CLC and URE in order to investigate their impact on FAPAR fluctuations in China and India. The higher impact of URE compared to CLC in terms of effective contributions suggests that URE plays a crucial role in shaping the atmospheric physics of both China, accounting for 45.26%, and India, registering 33.95%. Conversely, the effects of CLC and PAR residual factor (PRF) were more pronounced in India compared to China, with impacts of 8.21% and 53.03% compared to 4.21% and 46.70%, respectively.