2019
DOI: 10.1063/1.5093207
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Explicit time integration of the stiff chemical Langevin equations using computational singular perturbation

Abstract: A stable explicit time-scale splitting algorithm for stiff chemical Langevin equations (CLEs) is developed, based on the concept of computational singular perturbation. The drift term of the CLE is projected onto basis vectors that span the fast and slow subdomains. The corresponding fast modes exhaust quickly, in the mean sense, and the system state then evolves, with a mean drift controlled by slow modes, on a random manifold. The drift-driven time evolution of the state due to fast exhausted modes is modele… Show more

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Cited by 7 publications
(3 citation statements)
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“…It greatly reduces the computational cost compared to SSA, but it can be less accurate . Some implementations that shift between SSA and τ-leaping have been developed to prevent most of the loss of accuracy. , In terms of speed, a less accurate, but faster approach than τ-leaping is the chemical Langevin equation. With this approach, the error can be large for some systems, especially if the step size is not properly chosen. , …”
Section: Introductionmentioning
confidence: 99%
“…It greatly reduces the computational cost compared to SSA, but it can be less accurate . Some implementations that shift between SSA and τ-leaping have been developed to prevent most of the loss of accuracy. , In terms of speed, a less accurate, but faster approach than τ-leaping is the chemical Langevin equation. With this approach, the error can be large for some systems, especially if the step size is not properly chosen. , …”
Section: Introductionmentioning
confidence: 99%
“…Roughly speaking, most of such schemes divide the reactions (or species) into fast and slow ones. Then, the fast dynamics are resolved by making use of a quasiequilibrium assumption and the slow terms are integrated employing larger step sizes -see [13,18,26,27,28,30,37]. In this paper we do not assume that the system is clearly separable into fast and slow dynamics, therefore multirate methods are not discussed in what follows.…”
Section: Introductionmentioning
confidence: 99%
“…It must be noted that the CSP method provided the theoretical framework for designing solvers for deterministic sti problems (the CSP solver [48] and the G-Scheme solver [31,32]), for sti uncertain problems [49], for sti stochastic problems [50,51].…”
Section: Introductionmentioning
confidence: 99%