20The processes of cell proliferation, differentiation, migration, and self-organization during early 21 embryonic development are governed by dynamic, spatially and temporally varying morphogen 22 signals. Analogous tissue patterns emerge spontaneously in embryonic stem cell (ESC) models 23 for gastrulation, but mechanistic insight into this self-organization is limited by a lack of molecular 24 methods to precisely control morphogen signal dynamics. Here we combine optogenetic 25 stimulation and single-cell imaging approaches to study self-organization of human pluripotent 26 stem cells. Precise control of morphogen signal dynamics, achieved through activation of 27 canonical Wnt/b-catenin signaling over a broad high dynamic range (>500-fold) using an optoWnt 28 optogenetic system, drove broad transcriptional changes and mesendoderm differentiation of 29 human ESCs at high efficiency (>95% cells). Furthermore, activating Wnt signaling in 30 subpopulations of ESCs in 2D and 3D cultures induced cell self-organization and morphogenesis 31 reminiscent of human gastrulation, including changes in cell migration and epithelial to 32 mesenchymal transition. Our findings thus reveal an instructive role for Wnt in directing cell 33 patterning in this ESC model for gastrulation.
34Molecular regulation of embryonic morphogenesis, a process where seemingly identical cells 35 differentiate and organize into spatially defined regions, remains poorly understood in mammalian 36 developmental biology 1 . The emergence of such spatial organization is attributed to cell-intrinsic 37 differences in gene expression 2,3 or extrinsic asymmetries within the cell environment 4,5 . The 38 resulting variability in intracellular signaling leads to changes in cell migration, cell-cell 39 interactions, and/or cell polarity that in turn drive the coordinated organization of specific cell 40 populations 6,7 .41 Self-organization within the embryonic tissue proper, or epiblast, is first evident during 42 gastrulation, where subpopulations of cells reorganize and differentiate along distinct cell lineages 43 to form the three germ layers of the future organism 4 . Initially, asymmetric patterns of molecular 44 signals -morphogens such as Wnt, BMP, Nodal, and FGF -emerge across the morphologically 45 symmetric epiblast of the mouse embryo 4,8-12 . The establishment of such signaling asymmetry is 46 followed by morphological symmetry-breaking, where a subpopulation of posterior epiblast cells 47 undergoes mesendoderm differentiation and an epithelial to mesenchymal transition (EMT), then 48 migrates away from the epithelial epiblast cells in the region of the primitive streak 13,14 . During this 49 dynamic process of gastrulation, the temporal order and location of cell migration through the 50 primitive streak is correlated with downstream cell fate outcome, resulting in organization of the 51 developing cell lineages into defined regions within the embryo 13,15-17 .52 However, while advances in live embryo imaging and transcriptomic analysis hav...