The ability of cocoa smallholders to comply with the agricultural certification scheme has led to the improvement of commodity profits in agriculture, especially cocoa crops. This study aims to determine the participation of cocoa smallholders in agricultural certification schemes. Cocoa production contributes to the national economy by generating exchange profits. Factors such as the age of smallholders, gender, training, farming experience, education, and attitude influence the smallholder’s participation in the agricultural certification scheme. Educational status had a significant positive relationship with the certification scheme. Based on the review, the multinomial logistic regression model and other methods are used to analyse smallholders’ participation in the certification. Therefore, the certification has some benefits for smallholders in terms of food safety standards. Consequently, it can improve the safety of the consumer, the livelihood of smallholders, and the quality of agricultural products. This capacity will locate the cocoa crops at the global demand linked together from top to down of the value chain process.