The design of an accurate fault-tolerant control fault-tolerant control is still an active researches of switched hybrid system whose switching mechanism is unknown. In this paper, a new approach is proposed to deal with switching mode estimation and control problems for switched system subject to actuator faults and disturbances. First, the switching mode is estimated off-line using the Chiu clustering algorithm. Then, actuator fault estimation is proposed using data-based projection approach based on performance measures that allow fault estimation without relying on mathematical models and fault assumptions. Second, a novel switching control strategy is developed for actuator fault compensation and recovering the desired performances. These strategy integrate a set of controllers, corresponding to a set of partial modes to design a bank of switching control laws, compensating for the actuator fault effect and attenuating the sinusoidal disturbance. A new linear matrix inequality is proposed to compute control gains based on Lyapunov stability. This approach allows finding the optimal control gains matrices and ensure both actuator fault compensation and disturbance attenuation. Simulation results of two numerical examples shows the effectiveness of the proposed estimation and control strategies in spite of the presence of actuator faults and sinusoidal disturbance.