First Report of Barley virus G in Proso Millet (<i>Panicum miliaceum</i>) in Korea

Park, Chae Yeon; Jeong-hak, Oh，; Min, Hyun-Geun; Lee, H.-K.; Lee, S.-H.

doi:10.1094/pdis-07-16-0952-pdn

Cited by 12 publications

(4 citation statements)

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“…BVG was first detected and reported in barley plants that exhibited viral symptoms similar to those caused by BYDV in domestic barley. BVG infection has also been reported in other plant species, including proso millet (Panicum miliaceum) and foxtail millet (Setaria italica) [41][42][43][44]. HvEV is an endornavirus identified in various organisms, including plants, fungi, and oomycetes.…”

Section: Discussionmentioning

confidence: 99%

Analysis of Wheat Virome in Korea Using Illumina and Oxford Nanopore Sequencing Platforms

Lee

Kim

Jeong

2023

Plants

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Wheat (Triticum aestivum L.) is one of the most important staple crops in the world, along with maize and rice. More than 50 plant viruses are known to infect wheat worldwide. To date, there are no studies on the identification of viruses infecting wheat in Korea. Therefore, we investigated virome in wheat from three different geographical regions where wheat is mainly cultivated in Korea using Oxford Nanopore Technology (ONT) sequencing and Illumina sequencing. Five viral species, including those known to infect wheat, were identified using high-throughput sequencing strategies. Of these, barley virus G (BVG) and Hordeum vulgare endornavirus (HvEV) were consistently present in all libraries. Sugarcane yellow leaf virus (SCYLV) and wheat leaf yellowing-associated virus (WLYaV) were first identified in Korean wheat samples. The viruses identified by ONT and Illumina sequencing were compared using a heatmap. Though the ONT sequencing approach is less sensitive, the analysis results were similar to those of Illumina sequencing in our study. Both platforms served as reliable and powerful tools for detecting and identifying wheat viruses, achieving a balance between practicality and performance. The findings of this study will provide deeper insights into the wheat virosphere and further help improve disease management strategies.

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Section: Discussionmentioning

confidence: 99%

Analysis of Wheat Virome in Korea Using Illumina and Oxford Nanopore Sequencing Platforms

Lee

Kim

Jeong

2023

Plants

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“…(SPMV), Wheat streak mosaic virus (WSMV) (Cabanas , 2013;Park , 2017b;Reddy , 1998;Qiu Scholthof, 2001;Seifers , 1999;Sill Agusiobo, 1955; (Bai , 2002;Kendall , 1988;Matsukura , 2015;Srinivas , 2010;Toler, 1985;Yang Mirkov, 1997), BVG RSV 2 (Park , 2017b;. …”

Section: Maize Chlorotic Mottle Virus (Mcmv) Panicum Mosaic Virus (Pmentioning

confidence: 99%

A Survey of Viral Diseases of Proso Millet (Panicum miliaceum L.) and Sorghum (Sorghum bicolor L.) in South Korea

민¹,

박²,

이³

et al. 2017

Research in Plant Disease

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Throughout year 2015 to 2016, 101 proso millet and 200 sorghum samples were collected from five provinces in South Korea. The samples were subjected to paired-end RNA sequencing and further analyzed by RT-PCR. The results indicated that Rice black-streaked dwarf virus (RBSDV) was detected from sorghum collected in Gyeongsang province. The other four viruses, including RBSDV, Rice stripe virus (RSV), Barley virus G (BVG), and Cereal yellow dwarf virus (CYDV), were detected from proso millet. Among four viruses, both RSV and RBSDV were identified high frequency from proso millet collected from Gyeongsang province. Otherwise, BVG was nearly equally identified from five provinces, suggesting that the virus was supposedly widespread nationwide. RBSDV was first identified from both proso millet and sorghum in South Korea. The other virus annotated CYDV identified proso millet was shown to have relatively low identities compared to CYDV previously reported, suggesting that the virus might be new member of Polerovirus.

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“…BVG belongs to the tentative genus Polerovirus in the family Luteoviridae ; the virus was first reported on barley in South Korea ( 8 ). To determine the infection rate of BVG, total RNA was extracted from all 81 collected samples (2015, n = 60; 2016, n = 21) and tested by reverse transcription-PCR (RT-PCR) with BVG-specific primers ( 9 ). The RT-PCR results showed that 17 samples (2015, n = 7; 2016, n = 10) were positive for BVG.…”

Section: Genome Announcementmentioning

confidence: 99%

First Complete Genome Sequence of Barley Virus G Identified from Proso Millet ( Panicum miliaceum ) in South Korea

et al. 2017

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First Report of Barley virus G in Proso Millet (Panicum miliaceum) in Korea

Cited by 12 publications

References 1 publication

Analysis of Wheat Virome in Korea Using Illumina and Oxford Nanopore Sequencing Platforms

Analysis of Wheat Virome in Korea Using Illumina and Oxford Nanopore Sequencing Platforms

A Survey of Viral Diseases of Proso Millet (Panicum miliaceum L.) and Sorghum (Sorghum bicolor L.) in South Korea

First Complete Genome Sequence of Barley Virus G Identified from Proso Millet ( Panicum miliaceum ) in South Korea

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