2020
DOI: 10.1016/j.csbj.2020.03.029
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Fluorescent substrates for haloalkane dehalogenases: Novel probes for mechanistic studies and protein labeling

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Cited by 13 publications
(11 citation statements)
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“…In prior work, photocage testing was performed using a simple “dummy” carboxylic acid leaving group, typically acetic acid. Thus far, carboxylic acids, amines, alcohols, thiols, halides, xanthanes, and phenols have been released using BODIPY photocages. However, the evaluation of the photorelease of these functional groups was performed with the “first generation” BODIPY photocages, which are much less efficient for caging acetic acid than the most recently developed BODIPY photocages.…”
Section: Introductionmentioning
confidence: 99%
“…In prior work, photocage testing was performed using a simple “dummy” carboxylic acid leaving group, typically acetic acid. Thus far, carboxylic acids, amines, alcohols, thiols, halides, xanthanes, and phenols have been released using BODIPY photocages. However, the evaluation of the photorelease of these functional groups was performed with the “first generation” BODIPY photocages, which are much less efficient for caging acetic acid than the most recently developed BODIPY photocages.…”
Section: Introductionmentioning
confidence: 99%
“…30 Subsequent mutagenesis in the p3 region (F143L, W149A, and I211L) opened a new tunnel and introduced additional internal flexibility of the cap domain (variant LinB86), resulting in the most proficient haloalkane dehalogenase reported to date for the reaction with 1,2-dibromoethane (k cat = 57 s -1 at 37 C and pH 8.6). 31 A fluorogenic substrate 4-(bromomethyl)-6,7-dimethoxycoumarin (Br-COU) 32 was employed as a ''bulky'' molecular probe to assess the effects of the tunnel engineering (Figures S8 and S9).…”
Section: Transient Kinetics and Thermodynamics Of Haloalkane Dehalogenasementioning
confidence: 99%
“…A wide range of diverse HaloTag ligands have been designed and synthesized, offering a variety of properties (Figure B), e.g., improved photostability and brightness, high biocompatibility or fluorogenicity allowing “no-wash” labeling protocols or providing specific affinity handles . Despite the great diversity of ligands used, most of their applications always utilize the same tag protein DhaAHT, without considering the choice of another protein partner for better recognition of a specific ligand.…”
Section: Introductionmentioning
confidence: 99%