2003
DOI: 10.3354/dao054175
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Four years of monitoring for viral haemorrhagic septicaemia virus in marine waters around the United Kingdom

Abstract: Between 1995 and 1998, marine fish from around the coast of the UK were collected and samples analysed for viral haemorrhagic septicaemia virus (VHSV) using cell culture isolation methods. In 1997 and 1998 the samples were also analysed for VHSV by reverse transcription PCR (RT-PCR). A total of 1867 fish of 11 species were tested, but VHSV was isolated on only 1 occasion, from herring Clupea harengus, in 1996 . However, despite VHSV not being isolated in 1997 and 1998, in both years samples of herring from the… Show more

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Cited by 26 publications
(24 citation statements)
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“…A 468 base pair (bp) segment corresponding to nt 340 to 807 of the glycoprotein (G) gene was amplified by RT-PCR using the primer pair VHSVR1 5'-TTCTTTGGAGGGCAAAC-NATH-3' and VHSVF3 5'-GATCAGGTCCCCCAR-RTCNGT-3' , Dixon et al 2003. Total RNA was extracted from 100 µl of viral supernatant from infected FHM cells using the Trizol Reagent (Invitrogen) as described previously (Strømmen & Stone 1997).…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…A 468 base pair (bp) segment corresponding to nt 340 to 807 of the glycoprotein (G) gene was amplified by RT-PCR using the primer pair VHSVR1 5'-TTCTTTGGAGGGCAAAC-NATH-3' and VHSVF3 5'-GATCAGGTCCCCCAR-RTCNGT-3' , Dixon et al 2003. Total RNA was extracted from 100 µl of viral supernatant from infected FHM cells using the Trizol Reagent (Invitrogen) as described previously (Strømmen & Stone 1997).…”
Section: Methodsmentioning
confidence: 99%
“…An appropriately sized product (468 bp) was generated when using the VHSV-specific primer set VHSVR1 and VHSVF3 (Dixon et al 2003) and RNA extracted from the U13653 culture supernatant. No product was generated with the extraction control (Fig.…”
Section: Pcr and Sequence Analysismentioning
confidence: 99%
“…For Expt 1, reverse transcription (RT) was performed at 37°C for 1 h in a 20 µl volume solution comprising 1× Moloney murine leukemia virus reverse transcriptase (M-MLV-RT) reaction buffer (50 mM Tris [pH 8.3], 75 mM KCl, 10 mM DTT, 3 mM MgCl 2 ) containing 5.0 mM dNTP mix, 100 pmol of VHSV degenerate primer R1 (5'-CTT CTT TGG AGG GCA AAC NAT H-3') (Stone et al 1997, Dixon et al 2003, 200 units M-MLV-RT (Promega), 40 units of Rnasin ® and 5 µl of the total RNA extracted above.…”
Section: Methodsmentioning
confidence: 99%
“…A traditional PCR assay was used in Expt 1 in which a 468 bp segment corresponding to nucleotides 340 to 807 of the glycoprotein (G) gene was amplified with degenerate VHSV primers F3 (5'-GAT CAG GTC CCC CAR RTC NGT-3') and R1. This was followed by a semi-nested PCR assay with primers F1 (5'-CAG TCC CCA GGG ATG ATG NCC-3') and R1 (Stone et al 1997, Dixon et al 2003. Both PCR reactions were performed in a 50 µl reaction volume containing 1× GoTaq ® flexi buffer, 2.5 mM MgCl 2 solution, 5.0 mM dNTPs mix, 100 pmol of each primer, 2.5 units of GoTaq polymerase (Promega), 2.5 µl RT product and 2.5 µl of the PCR reaction from the firstround PCR.…”
Section: Methodsmentioning
confidence: 99%
“…In addition to asymptomatic farmed fish, infectious IPNV has been isolated from cohabitating farmed and wild fish, shellfish, sediments below the net pens, and birds (7,23,24). IPNV has been isolated from wild marine fish (including but not limited to saithe, Atlantic cod, pollock, and hake) species in the vicinity of marine salmon farms but has also been detected in wild salmonid fish that have had no contact with hatchery-reared fish (25). In the case of IMTA, it is of great importance to determine whether the vastly increased number of mussels, e.g., approximately 25 tons for an average-sized pen, on an IMTA farm have the potential to accumulate IPNV and shed virus at a rate and quantity that would impact Atlantic salmon.…”
mentioning
confidence: 99%