Indian river basins are intensively managed with country-specific agricultural practices of cultivating submerged paddy and uncontrolled groundwater irrigation. Numerical experiments with the state-of-the-art land surface models, such as Variable Infiltration Capacity (VIC), without incorporating region-specific practices, could be misleading. Here, we coupled VIC with 2D groundwater model AMBHAS, incorporating India-specific irrigation practices and crop practices, including submerged paddy fields. We performed numerical experiments to understand the causal factors of groundwater depletion in the Northwest Indo-Gangetic plain. We identify widespread flood irrigation and cultivation of water-intensive paddy as critical drivers of the declining groundwater scenario. Our numerical experiments suggest that the introduction of drip irrigation reduces groundwater depletion in the Northwest, but does not change the sign of groundwater level trends. The groundwater levels in the non-paddy fields of the middle IGP are less sensitive to irrigation practices due to the high return flow to groundwater for flood irrigation.