2006
DOI: 10.1016/j.tig.2006.09.013
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From Mendelian to molecular genetics: the Xiphophorus melanoma model

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Cited by 116 publications
(147 citation statements)
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“…The Xiphophorus melanoma receptor kinase gene (XMRK) behaves as a dominant oncogene in this fish model and is a mutated derivative of the fish ortholog for the human epidermal growth factor receptor (EGFR/ErbB-1). Consistent with the activity of mammalian EGFR in melanocytes (15)(16)(17), activation of the XMRK oncoprotein leads to numerous downstream signaling cascades including, but not limited to, the RAS/RAF/MAPK and PI3-K/AKT signaling pathways (12). In addition to these signaling cascades, the transformed phenotype in Xiphophorus also involves participation of transcription factors (e.g., STAT5) and glycoproteins (e.g., osteopontin, OPN) that are intimately involved in cellular proliferation and antiapoptotic responses that characterize numerous human cancers.…”
mentioning
confidence: 76%
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“…The Xiphophorus melanoma receptor kinase gene (XMRK) behaves as a dominant oncogene in this fish model and is a mutated derivative of the fish ortholog for the human epidermal growth factor receptor (EGFR/ErbB-1). Consistent with the activity of mammalian EGFR in melanocytes (15)(16)(17), activation of the XMRK oncoprotein leads to numerous downstream signaling cascades including, but not limited to, the RAS/RAF/MAPK and PI3-K/AKT signaling pathways (12). In addition to these signaling cascades, the transformed phenotype in Xiphophorus also involves participation of transcription factors (e.g., STAT5) and glycoproteins (e.g., osteopontin, OPN) that are intimately involved in cellular proliferation and antiapoptotic responses that characterize numerous human cancers.…”
mentioning
confidence: 76%
“…The classical, spontaneous Xiphophorus hybrid melanoma model has been studied for over 80 years and offers powerful genetic and biochemical approaches for revealing determinants of melanomagenesis (12)(13)(14). The Xiphophorus melanoma receptor kinase gene (XMRK) behaves as a dominant oncogene in this fish model and is a mutated derivative of the fish ortholog for the human epidermal growth factor receptor (EGFR/ErbB-1).…”
mentioning
confidence: 99%
“…Table 3 shows five currently popular programs available for short read mapping that will be evaluated herein. To evaluate these programs, we used an X. maculatus reference transcriptome [for description of the species see section 2.7 and Kallman and Kazianis, 2006;Meierjohann and Schartl, 2006)] built from over 200 million paired-end reads sequenced from the brain, heart, and liver tissues of mature individuals using the Illumina GAIIx platform (Expression Analysis ® Inc. Durham, NC). We used the Velvet assembly package (Zerbino and Birney, 2008) to integrate the combined read set with a hash length (kmer size) of 43.…”
Section: Rna Short Read Mappingmentioning
confidence: 99%
“…The genus Xiphophorus has at least 27 species of live-bearing fishes found from northern Mexico south into Belize and Guatemala (Kallman and Kazianis, 2006). The Xiphophorus genus couples extreme genetic variability among Xiphophorus species with the capability of producing fertile interspecies hybrids that have allowed chromosomal inheritance of complex traits to be followed into individual F 1 and backcross hybrid progeny Walter and Kazianis, 2001;Meierjohann and Schartl, 2006). Using interspecies hybrids provides a unique opportunity to reveal underlying mechanisms of genetic variation.…”
Section: Snp Identification and Allele Specific Gene Expressionmentioning
confidence: 99%
“…Wildtype Xiphophorine fish are insusceptible of developing neoplasia. However, certain backcrosses of swordtail (Xiphophorus helleri) with platyfish (Xiphophorus maculatus) as the recurrent parent produce offspring that can develop spontaneous neoplasia/melanoma in a Mendelian fashion [9,10]. Currently, there is only fragmentary knowledge about the histochemical and biochemical changes that accompany the very early stages of neural crest cells/premelanoblasts invasion into the developing skin of Xiphophorus hybrid fish.…”
Section: Introductionmentioning
confidence: 99%