Genetic diversity and differentiation of Russian common carp (Cyprinus carpio L.) breeds inferred from RAPD markers

Ludanny, R. I.; Chrisanfova, G. G.; Vasilyev, V. A.; Prizenko, V. K.; Bogeruk, A. K.; Ryskov, A. P.; Semyenova, S. K.

doi:10.1134/s1022795406080126

Cited by 11 publications

(14 citation statements)

References 9 publications

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“…In Russia, significant difference was observed between strains of common carp cultivated in Eastern Europe (Hungarian, Angelinskii, Cherepetskii, Stavropol, Ropsha) and the Amur wild common carp as revealed by RAPD markers [15]. Interestingly, the analysis with mtDNA showed that the Amur carp holds mtDNA haplotypes, one of those is very close to that of the European carp while another one is almost identical with that of the East Asian carp [16,50].…”

Section: Genetic Diversity Of Common Carpmentioning

confidence: 98%

“…These include both protein (i.e. allozymes) [7,8] and DNA-based markers such as microsatellites [9][10][11], amplified fragment length polymorphisms (AFLPs) [10,12], restriction fragment length polymorphisms (RFLPs) [13,14], random amplification of polymorphic DNA (RAPD) [15], and mitochondrial DNA (mtDNA) variability [16,17]. Advantages and disadvantages of using each marker type in the aquaculture research have been thoroughly reviewed by Liu and Cordes [18] and hence are beyond the scope of this review.…”

Section: Molecular Markersmentioning

confidence: 99%

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Genetic evolution and diversity of common carp Cyprinus carpio L.

Chistiakov

Voronova

2009

Open Life Sciences

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Knowledge of genetic variation and population structure of existing strains of both farmed and wild common carp Cyprinus carpio L.is absolutely necessary for any efficient fish management and/or conservation program. To assess genetic diversity in common carp populations, a variety of molecular markers were analyzed. Of those, microsatellites and mitochondrial DNA were most frequently used in the analysis of genetic diversity and genome evolution of common carp. Using microsatellites showed that the genome evolution in common carp exhibited two waves of rearrangements: one whole-genome duplication (12-16 million years ago) and a more recent wave of segmental duplications occurring between 2.3 and 6.8 million years ago. The genome duplication event has resulted in tetraploidy since the common carp currently harbors a substantial portion of duplicated loci in its genome and twice the number of chromosomes (n =100-104) of most other cyprinid fishes. The variation in domesticated carp populations is significantly less than that in wild populations, which probably arises from the loss of variation due to founder effects and genetic drift. Genetic differentiation between the European carp C.c. carpio and Asian carp C.c. haematopterus is clearly evident. In Asia, two carp subspecies, C.c. haematopterus and C. c. varidivlaceus, seem to be also genetically distinct.

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Section: Genetic Diversity Of Common Carpmentioning

confidence: 98%

Section: Molecular Markersmentioning

confidence: 99%

Genetic evolution and diversity of common carp Cyprinus carpio L.

Chistiakov

Voronova

2009

Open Life Sciences

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“…Earlier, using nuclear RAPDs and microsatellite markers, differentiation of 107 fish samples, repre senting the sample of Amur wild common carp and 11 common carp breeds with the known history of origin, was performed [10,11]. Regardless of the nuclear marker type, all samples examined fell into two groups.…”

Section: Discussionmentioning

confidence: 99%

“…RAPD fingerprinting was performed for differentiation of Russian populations of Amur wild common carp and 11 Russian and foreign common carp breeds [10]. Cluster analysis showed that all individuals of each breed examined formed their own clusters, which formed two groups.…”

Section: Polymorphism Of the Cytochrome Oxidase B Gene (Cyt B) In Rusmentioning

confidence: 99%