Genome–wide Analysis of Ethylene Responsive Factor in Maize: An in Silico Approach

Hussain, Sarfaraz

doi:10.15666/aeer/1405_177200

Cited by 5 publications

(2 citation statements)

References 58 publications

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“…Ethylene is a methionine-derived metabolite that is sensitive to biotic and abiotic stressors. Stage ethylene controls shoot growth, stem thickness, root elongation, stomatal density, and leaf abscission at the seedling level [ 52 ]. It has, however, been extensively researched in the process of plant senescence, although it is less well understood in drought-induced senescence [ 53 ].…”

Section: Drought-responsive Genes Are Regulated By Plant Hormonesmentioning

confidence: 99%

Molecular Aspects of MicroRNAs and Phytohormonal Signaling in Response to Drought Stress: A Review

Ahmad

Wang

Ijaz

et al. 2022

CIMB

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Phytohormones play an essential role in plant growth and development in response to environmental stresses. However, plant hormones require a complex signaling network combined with other signaling pathways to perform their proper functions. Thus, multiple phytohormonal signaling pathways are a prerequisite for understanding plant defense mechanism against stressful conditions. MicroRNAs (miRNAs) are master regulators of eukaryotic gene expression and are also influenced by a wide range of plant development events by suppressing their target genes. In recent decades, the mechanisms of phytohormone biosynthesis, signaling, pathways of miRNA biosynthesis and regulation were profoundly characterized. Recent findings have shown that miRNAs and plant hormones are integrated with the regulation of environmental stress. miRNAs target several components of phytohormone pathways, and plant hormones also regulate the expression of miRNAs or their target genes inversely. In this article, recent developments related to molecular linkages between miRNAs and phytohormones were reviewed, focusing on drought stress.

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Section: Drought-responsive Genes Are Regulated By Plant Hormonesmentioning

confidence: 99%

Molecular Aspects of MicroRNAs and Phytohormonal Signaling in Response to Drought Stress: A Review

Ahmad

Wang

Ijaz

et al. 2022

CIMB

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“…ERF family has only one AP2/ERF domain and is involved in ethylene signal transduction. [14,15], pathogen-stimuli and gene expression [16]. Recently, ERF genes have been studied in maize [17].…”

Section: Introductionmentioning

confidence: 99%

Genome-Wide in Silico Analysis of Ethylene Responsive Factors Associated with Stress Responses in Wheat

Aamer¹,

Gul²,

Amir³

et al. 2020

Preprint

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Background: Transcription factors have largely been involved in the qualitative and quantitative regulation of gene expression. Among the diverse transcription factor families, AP2 (Apetala2) /ERF (Ethylene responsive factors superfamily is a well-known plant family of proteins for controlling various and diverse stress responses in plants. Ethylene responsive factors (ERF) are known to be vital for generating various stress responses.Results: A total of 181 TaERF proteins were identified in Triticum aestivum. Phylogenetic analysis, conserved motif analysis, chromosomal localization, gene structure analysis and multiple sequence alignment of ERF genes along with protein- protein interaction network analysis was performed. The phylogenetic analysis led to classification of these ERF members into 10 major groups and provided evolutionary relationship among the groups on the basis of similar protein motifs like which include WLG and 15 others. Further analysis revealed exon number, molecular weight, isoelectric point, and length of proteins. Gene ontology analysis concluded that TaERF were involved in responses to many Stressors, revealing their possible function. Sub cellular localization revealed that most of the proteins were confined to nucleus, cytoplasm and mitochondria. Network analysis provided insight of proteins involved in generating responses to stresses based on topological analysis and betweeness centrality of the network based on network theory.Conclusions: Genome-wide identification, gene structure, phylogeny and network analysis of TaERF proteins in Triticum aestivum supplied a solid theoretical foundation for the functional study of TaERF family. The bioinformatics analyses of 181 TaERF were implemented systematically revealing proteins characteristics and structural information.

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Broccoli Plants Over-expressing an ERF Transcription Factor Gene BoERF1 Facilitates Both Salt Stress and Sclerotinia Stem Rot Resistance

Jiang

Zhang

et al. 2018

J Plant Growth Regul

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Genome–wide Analysis of Ethylene Responsive Factor in Maize: An in Silico Approach

Cited by 5 publications

References 58 publications

Molecular Aspects of MicroRNAs and Phytohormonal Signaling in Response to Drought Stress: A Review

Molecular Aspects of MicroRNAs and Phytohormonal Signaling in Response to Drought Stress: A Review

Genome-Wide in Silico Analysis of Ethylene Responsive Factors Associated with Stress Responses in Wheat

Broccoli Plants Over-expressing an ERF Transcription Factor Gene BoERF1 Facilitates Both Salt Stress and Sclerotinia Stem Rot Resistance

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