Edited by Laszlo NagyDrosophila Ceramide Synthase (CerS) Schlank regulates both ceramide synthesis and fat metabolism. Schlank contains a catalytic lag1p motif and, like many CerS in other species, a homeodomain of unknown function. Here, we show that the Drosophila CerS Schlank is imported into the nucleus and requires two nuclear localization signals (NLSs) within its homeodomain and functional Importin-b import machinery. Expression of Schlank variants containing the homeodomain without functional lag1p motif rescued the fat metabolism phenotype of schlank mutants whereas a variant with a mutated NLS site did not rescue. Thus, the homeodomain of Schlank is involved in the regulation of lipid metabolism independent of the catalytic lag1p motif.Keywords: ceramide synthase; Drosophila; homeodomain; importin; lipid homeostasis; nuclear function Ceramides and sphingolipids are key intermediates in diverse cellular processes for growth, stress resistance, apoptosis, neurodegeneration, insulin function, and lipid homeostasis [1][2][3][4][5].In synthesis of ceramide, Ceramide Synthases (CerSs) acylate a sphingoid long-chain base (LCB) with a fatty acyl-CoA of distinct length to generate (dihydro) ceramide, the backbone of all complex sphAbbreviations aa, amino acid; ASAH1, acid ceramidase; ATF2, activating transcription factor 2; cDNA, complementary DNA; CerSs, ceramide synthases; dsRNA, double-stranded RNA; ER, endoplasmic reticulum; Gal4, galactose-responsive transcription factor; GFP, green fluorescent protein; GlcT-1, glucosylceramide synthase; H215D, change in a histidine at position 215 of schlank into glutamate; INM, inner nuclear membrane;