Biosynthesis of the variable core domain of lipooligosaccharide (LOS) inNeisseria gonorrhoeae is mediated by glycosyl transferases encoded by lgtABCDE. Changes within homopolymeric runs within lgtA, lgtC, and lgtD affect the expression state of these genes, with the nature of the LOS expressed determined by the functionality of these genes. However, the mechanism for modulating the amount of multiple LOS chemotypes expressed in a single cell is not understood. Using mutants containing polar disruptions within the lgtABCDE locus, we determined that the expression of this locus is mediated by multiple promoters and that disruption of transcription from these promoters alters the relative levels of simultaneously expressed LOS chemotypes. Expression of the lgtABCDE locus was quantified by using xylE transcriptional fusions, and the data indicate that this locus is transcribed in trace amounts and that subtle changes in transcription result in phenotypic changes. By using rapid amplification of 5 cDNA ends, transcriptional start sites and promoter sequences were identified within lgtABCDE. Most of these promoters possessed 50 to 67% homology with the consensus gearbox promoter sequence of Escherichia coli.Neisseria gonorrhoeae is an obligate human pathogen that causes diseases of mucosal surfaces (see reference 32 for a review). Because the gonococcus is capable of proliferating in different physiological milieus, it has developed a variety of mechanisms for adapting to these environments. Lipooligosaccharide (LOS) is indispensable for disease pathogenesis. It is immunogenic, highly pyrogenic, and responsible for the localized inflammation and scarring characteristic of gonococcal infections and for the septic shock that results from disseminated disease (21-23, 31, 39, 45 Baltimore, Md.]). In addition, specific chemotypes of LOS confer complement resistance (34) and facilitate intracellular invasion (47). LOS molecules are heterogeneous, with a single cell often simultaneously expressing two or more chemotypes in various proportions (2,3,11,46). LOS also undergoes phase variation, and distinct LOS chemotypes are favored for survival of the gonococcus within different regions of the human body and at various points during the pathogenic process (15,32,49,53,55). We believe that the expression of the correct LOS chemotype(s) by the gonococcus at the correct time during infection is essential for establishing and maintaining infection.Our understanding of the regulatory mechanisms that affect LOS biosynthesis and expression remains incomplete. Biosynthesis of the variable oligosaccharide portion of LOS is mediated by seven LOS glycosyl transferase (lgt) genes (7,13,20). Strand slippage in homopolymeric tracts within the coding sequence of lgtA, lgtC, lgtD, and lgtG during DNA replication leads to reading frameshifts in these genes. These changes result in the production of inactivate glycosyl transferases, thus altering the LOS chemotype(s) that is expressed by a given cell (7,11,13,56). Gonococcal LOS expression can...